RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 EFCAB14O75071 495 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
HPS4-218ENST00000519774 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
HPS4-218ENST00000519774 EIF4BP23588 611 aaKnown RBP13.14□□□□□ -0.31
HPS4-218ENST00000519774 ARL2P36404 184 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 PHKA2P46019 1235 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 DEFB103AP81534 67 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 CDC42EP1Q00587 391 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 RAD51AP2Q09MP3 1159 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 CAPSQ13938 189 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 TFDP1Q14186 410 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
HPS4-218ENST00000519774 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 ODR4Q5SWX8 454 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 RINT1Q6NUQ1 792 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 GPBP1Q86WP2 473 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 PDILTQ8N807 584 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 LEO1Q8WVC0 666 aaPredicted RBP13.14□□□□□ -0.31
HPS4-218ENST00000519774 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
HPS4-218ENST00000519774 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 ERVK-5Q9HDB9 667 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 RCOR1Q9UKL0 485 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 ST3GAL5Q9UNP4 418 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 RBM19Q9Y4C8 960 aaKnown RBP13.14□□□□□ -0.31
HPS4-218ENST00000519774 GBF1Q92538 1859 aa13.14□□□□□ -0.31
HPS4-218ENST00000519774 LRRIQ4A6NIV6 560 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 SOX1O00570 391 aaPredicted RBP13.13□□□□□ -0.31
HPS4-218ENST00000519774 GPR182O15218 404 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 ASAP2O43150 1006 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 HIP1RO75146 1068 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 AMHP03971 560 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
HPS4-218ENST00000519774 GLRA2P23416 452 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 STAT6P42226 847 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 SLC12A3P55017 1021 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 MCM6Q14566 821 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 LRIT3Q3SXY7 679 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
HPS4-218ENST00000519774 RRAGBQ5VZM2 374 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 FAM117BQ6P1L5 589 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.13□□□□□ -0.314e-8■□□□□ 10.8
HPS4-218ENST00000519774 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 TMCO2Q7Z6W1 182 aaPredicted RBP13.13□□□□□ -0.31
HPS4-218ENST00000519774 MYOCDQ8IZQ8 938 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 KCTD17Q8N5Z5 321 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 SYT2Q8N9I0 419 aaPredicted RBP13.13□□□□□ -0.31
HPS4-218ENST00000519774 LINC01599Q8WXQ3 324 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 BSNDQ8WZ55 320 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 RAD54LQ92698 747 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 SLC9A7Q96T83 725 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 GDPD2Q9HCC8 539 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 BLOC1S4Q9NUP1 217 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
HPS4-218ENST00000519774 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
HPS4-218ENST00000519774 MYH11P35749 1972 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 A0A087X0B3 334 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.12□□□□□ -0.31
HPS4-218ENST00000519774 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.12□□□□□ -0.31
HPS4-218ENST00000519774 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
HPS4-218ENST00000519774 DENND3A2RUS2 1198 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 INO80B-WBP1J3KQ70 363 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 KRT18P05783 430 aaKnown RBP13.12□□□□□ -0.31
HPS4-218ENST00000519774 POTEHQ6S545 545 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 SRGAP1Q7Z6B7 1085 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 KIFAP3Q92845 792 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 LRCH3Q96II8 777 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 FTHL17Q9BXU8 183 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 INO80BQ9C086 356 aaPredicted RBP13.12□□□□□ -0.31
HPS4-218ENST00000519774 SCAND2PQ9GZW5 306 aaPredicted RBP13.12□□□□□ -0.31
HPS4-218ENST00000519774 TMX1Q9H3N1 280 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 MINDY3Q9H8M7 445 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 IFT122Q9HBG6 1241 aa13.12□□□□□ -0.31
HPS4-218ENST00000519774 NPHP3-ACAD11A0A0J9YXS1 232 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 MGEA5O60502 916 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 UPP2O95045 317 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 GUCY2CP25092 1073 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 RABGGTBP53611 331 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 PTENP60484 403 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 PPP2R5AQ15172 486 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 HERC6Q8IVU3 1022 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 ZBTB8OSQ8IWT0 167 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 DEPTORQ8TB45 409 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 IFT74Q96LB3 600 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 DRC1Q96MC2 740 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 ADAM2Q99965 735 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 FAM13BQ9NYF5 915 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 CHMP5Q9NZZ3 219 aa13.11□□□□□ -0.31
HPS4-218ENST00000519774 PIN4Q9Y237 131 aaKnown RBP13.11□□□□□ -0.31
HPS4-218ENST00000519774 SFI1A8K8P3 1242 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 ENPP3O14638 875 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 ERLIN2O94905 339 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 ZSCAN20P17040 1043 aaPredicted RBP13.1□□□□□ -0.31
HPS4-218ENST00000519774 LIG1P18858 919 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 PBX2P40425 430 aa13.1□□□□□ -0.31
HPS4-218ENST00000519774 NAMPTP43490 491 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms