RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 KANK3Q6NY19 840 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 CCDC149Q6ZUS6 474 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 OTOP3Q7RTS5 596 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 GPR149Q86SP6 731 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 CABP7Q86V35 215 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 PPFIBP1Q86W92 1011 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 TMEM173Q86WV6 379 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 LRRC71Q8N4P6 559 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 DTWD2Q8NBA8 298 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 TMEM87AQ8NBN3 555 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 AUTS2Q8WXX7 1259 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 ZNF577Q9BSK1 485 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 TRAIPQ9BWF2 469 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 SEMA4AQ9H3S1 761 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 SFXN1Q9H9B4 322 aa13.98□□□□□ -0.17
TRAPPC9-204ENST00000518723 APOA5Q6Q788 366 aa13.97□□□□□ -0.17
TRAPPC9-204ENST00000518723 TMC5Q6UXY8 1006 aa13.97□□□□□ -0.17
TRAPPC9-204ENST00000518723 SYNE3Q6ZMZ3 975 aa13.97□□□□□ -0.17
TRAPPC9-204ENST00000518723 IGSF21Q96ID5 467 aa13.97□□□□□ -0.17
TRAPPC9-204ENST00000518723 LRRC2Q9BYS8 371 aa13.97□□□□□ -0.17
TRAPPC9-204ENST00000518723 KCNK12Q9HB15 430 aa13.97□□□□□ -0.17
TRAPPC9-204ENST00000518723 CHST12Q9NRB3 414 aa13.97□□□□□ -0.17
TRAPPC9-204ENST00000518723 GABBR1Q9UBS5 961 aa13.97□□□□□ -0.17
TRAPPC9-204ENST00000518723 EPG5Q9HCE0 2579 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 DENND4AQ7Z401 1863 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 SLC27A2O14975 620 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 ZC3H11AO75152 810 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 OATP04181 439 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 PHKA2P46019 1235 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 PTPN14Q15678 1187 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 C15orf39Q6ZRI6 1047 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 TRMT1LQ7Z2T5 733 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 SIX5Q8N196 739 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 EXOC6Q8TAG9 804 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 FEZF2Q8TBJ5 459 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 IGSF9Q9P2J2 1179 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 STK39Q9UEW8 545 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 TCEAL9Q9UHQ7 104 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 FBXL21Q9UKT6 434 aa13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 V9GY48 417 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-204ENST00000518723 CEP250Q9BV73 2442 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 ZNF862O60290 1169 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 GALTP07902 379 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 FGFR4P22455 802 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 CDC42EP1Q00587 391 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 RTN1Q16799 776 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 JAKMIP3Q5VZ66 844 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 GLB1LQ6UWU2 654 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 BCL7CQ8WUZ0 217 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 ZNF668Q96K58 619 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 SCLT1Q96NL6 688 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 NRDE2Q9H7Z3 1164 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 NRBP2Q9NSY0 501 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 TBC1D13Q9NVG8 400 aa13.95□□□□□ -0.18
TRAPPC9-204ENST00000518723 ESYT2A0FGR8 921 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 WDR64B1ANS9 1081 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 LMNAP02545 664 aaKnown RBP13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 SKIP12755 728 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 CIITAP33076 1130 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 CLCN4P51793 760 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 PRKCEQ02156 737 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 NECTIN1Q15223 517 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 LETM2Q2VYF4 491 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 OTOGLQ3ZCN5 2332 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 NOMO2Q5JPE7 1267 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 CREB3L3Q68CJ9 461 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 NLRP7Q8WX94 980 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 RMDN1Q96DB5 314 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 VN1R3Q9BXE9 311 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 EMILIN2Q9BXX0 1053 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 RHOBTB2Q9BYZ6 727 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 WNT16Q9UBV4 365 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 SAMM50Q9Y512 469 aa13.94□□□□□ -0.18
TRAPPC9-204ENST00000518723 ZBTB43O43298 467 aa13.93□□□□□ -0.18
TRAPPC9-204ENST00000518723 LILRB3O75022 631 aa13.93□□□□□ -0.18
TRAPPC9-204ENST00000518723 ZNF623O75123 536 aa13.93□□□□□ -0.18
TRAPPC9-204ENST00000518723 TARBP2Q15633 366 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-204ENST00000518723 CYP26C1Q6V0L0 522 aa13.93□□□□□ -0.18
TRAPPC9-204ENST00000518723 LENG9Q96B70 501 aa13.93□□□□□ -0.18
TRAPPC9-204ENST00000518723 KLHL5Q96PQ7 755 aa13.93□□□□□ -0.18
TRAPPC9-204ENST00000518723 GCOM2Q9BZD3 368 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC9-204ENST00000518723 ZMYND12Q9H0C1 365 aa13.93□□□□□ -0.18
TRAPPC9-204ENST00000518723 MYH9P35579 1960 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 MED19A0JLT2 244 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 N4BP1O75113 896 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 CSDE1O75534 798 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 OFD1O75665 1012 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 CNPP09543 421 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 SFPQP23246 707 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 KLRC2P26717 231 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 SLC11A1P49279 550 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 RAB27AP51159 221 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 RCAN1P53805 252 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 RNASELQ05823 741 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 TBC1D8BQ0IIM8 1120 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 NONOQ15233 471 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 PFKFB3Q16875 520 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms