RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PDCD4Q53EL6 469 aaKnown RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 GKAP1Q5VSY0 366 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 NCAPH2Q6IBW4 605 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 IRGCQ6NXR0 463 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 KDM7AQ6ZMT4 941 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 C11orf74Q86VG3 221 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 HOOK3Q86VS8 718 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 CROCCP3Q8IVE0 287 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 SCAIQ8N9R8 606 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCDC63Q8NA47 563 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 GDAP1Q8TB36 358 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 KLHDC4Q8TBB5 520 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 GRIN3AQ8TCU5 1115 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 GPBAR1Q8TDU6 330 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 SH3TC2Q8TF17 1288 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZNF473Q8WTR7 871 aaKnown RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCDC12Q8WUD4 166 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 FAM168AQ92567 244 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 TAF4BQ92750 862 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 KIFAP3Q92845 792 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ISL2Q96A47 359 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 RUNDC1Q96C34 613 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 HAUS1Q96CS2 278 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 STAMBPL1Q96FJ0 436 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 HIC2Q96JB3 615 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 CLIC6Q96NY7 704 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 OLFM3Q96PB7 478 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 GBP5Q96PP8 586 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCT7Q99832 543 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 SLC39A3Q9BRY0 314 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 NUP58Q9BVL2 599 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCDC68Q9H2F9 335 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ANKZF1Q9H8Y5 726 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 SUCLA2Q9P2R7 463 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 PCOLCE2Q9UKZ9 415 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 MTUS1Q9ULD2 1270 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 LIMCH1Q9UPQ0 1083 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 PPP2R2CQ9Y2T4 447 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 LRRC42Q9Y546 428 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 FADS3Q9Y5Q0 445 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 FANCD2Q9BXW9 1451 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ADGRL3Q9HAR2 1447 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 LRRC10BA6NIK2 292 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 IKBKBO14920 756 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 N4BP3O15049 544 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CYP27B1O15528 508 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 IDH3BO43837 385 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 N4BP1O75113 896 aaKnown RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 PDHBP11177 359 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 ALADP13716 330 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 BMP6P22004 513 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CALB2P22676 271 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CA8P35219 290 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 PCK1P35558 622 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 MATR3P43243 847 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 ELF3P78545 371 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 MAP3K12Q12852 859 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 IKQ13123 557 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CYLC2Q14093 348 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 KPNB1Q14974 876 aaKnown RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 SAFBQ15424 915 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCDC85BQ15834 202 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 AOC3Q16853 763 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 SKIDA1Q1XH10 827 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 TRIM71Q2Q1W2 868 aaKnown RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 ANKRD20A8PQ5CZ79 823 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CFAP58Q5T655 872 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 NAA35Q5VZE5 725 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 LARP1BQ659C4 914 aaKnown RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 SPECC1LQ69YQ0 1117 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 EMBQ6PCB8 327 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 FBXO33Q7Z6M2 555 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 NLRP14Q86W24 1093 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 TOP6BLQ8N6T0 577 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 ABHD8Q96I13 439 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CLMNQ96JQ2 1002 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 HRASLS5Q96KN8 279 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 SPATA32Q96LK8 384 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 HEXIM2Q96MH2 286 aaKnown RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 GSDMAQ96QA5 445 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 RAB3IPQ96QF0 476 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCT8L2Q96SF2 557 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CENPKQ9BS16 269 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 TANGO6Q9C0B7 1094 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 TNKS2Q9H2K2 1166 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 PARVGQ9HBI0 331 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 COMMD8Q9NX08 183 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 CACNA2D2Q9NY47 1150 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 DACT1Q9NYF0 836 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 SAP30BPQ9UHR5 308 aaKnown RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 PNMA2Q9UL42 364 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 RPL26L1Q9UNX3 145 aaKnown RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 SCAF8Q9UPN6 1271 aaKnown RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 SUGT1Q9Y2Z0 365 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 N6AMT1Q9Y5N5 214 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 USP16Q9Y5T5 823 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 NR2E3Q9Y5X4 410 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms