RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TMEM87AQ8NBN3 555 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 NDRG1Q92597 394 aaKnown RBP3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 ATG4CQ96DT6 458 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 PHACTR3Q96KR7 559 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 SLITRK1Q96PX8 696 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 TTPALQ9BTX7 342 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 DPH1Q9BZG8 443 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 TANGO6Q9C0B7 1094 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 RNF39Q9H2S5 420 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 GABBR1Q9UBS5 961 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 ADAM21Q9UKJ8 722 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 VPS4AQ9UN37 437 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 INVSQ9Y283 1065 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 RPH3AQ9Y2J0 694 aaPredicted RBP3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 SSUH2Q9Y2M2 353 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 MXRA5Q9NR99 2828 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 ATXN2Q99700 1313 aaKnown RBP3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 MYH3P11055 1940 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 TACC2O95359 2948 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 ENPP3O14638 875 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 PLIN1O60240 522 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 GJB3O75712 270 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 LDLRP01130 860 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 NOP2P46087 812 aaKnown RBP3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 ART1P52961 327 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 RNASELQ05823 741 aaKnown RBP3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 TARDBPQ13148 414 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 SP5Q6BEB4 398 aaPredicted RBP3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 TGIF2LYQ8IUE0 185 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 DNERQ8NFT8 737 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 BAHD1Q8TBE0 780 aaPredicted RBP3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 SETD7Q8WTS6 366 aaKnown RBP3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 ARSGQ96EG1 525 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 PHF20Q9BVI0 1012 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 SPRTNQ9H040 489 aaPredicted RBP3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 HCSTQ9UBK5 93 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 GTF2IRD1Q9UHL9 959 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 SLC6A14Q9UN76 642 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 SUPT16HQ9Y5B9 1047 aaKnown RBP3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 TENM1Q9UKZ4 2725 aa3.95□□□□□ -1.78
SCARNA13-201ENST00000516672 F5P12259 2224 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 CCDC195A0A1B0GUA6 201 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 HEATR9A2RTY3 570 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 KPNA6O60684 536 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 CXCL14O95715 111 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 ITGA6P23229 1130 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 PPP2R2AP63151 447 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 ARL13BQ3SXY8 428 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 TAPT1Q6NXT6 567 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 AGMOQ6ZNB7 445 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 USP49Q70CQ1 688 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 MTSS1LQ765P7 747 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 SV2AQ7L0J3 742 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 EEPD1Q7L9B9 569 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 SYT12Q8IV01 421 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 CCDC191Q8NCU4 936 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 OR6J1Q8NGC5 347 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 PNISRQ8TF01 805 aaKnown RBP3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 AUTS2Q8WXX7 1259 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 DNASE1L2Q92874 299 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 YTHDC1Q96MU7 727 aaKnown RBP3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 SMR3AQ99954 134 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 KIAA1683Q9H0B3 1180 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 DLL4Q9NR61 685 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 GEMIN8Q9NWZ8 242 aaKnown RBP3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 HDAC6Q9UBN7 1215 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 HERC5Q9UII4 1024 aaKnown RBP3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 SLC8A2Q9UPR5 921 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 ZFP37Q9Y6Q3 630 aaPredicted RBP3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 DDX49Q9Y6V7 483 aaKnown RBP3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 CNTNAP2Q9UHC6 1331 aa3.94□□□□□ -1.78
SCARNA13-201ENST00000516672 WDR81Q562E7 1941 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 NSD1Q96L73 2696 aaPredicted RBP3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 SVEP1Q4LDE5 3571 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 TBKBP1A7MCY6 615 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 ARHGAP33O14559 1287 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 MSI1O43347 362 aaKnown RBP3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 PRICKLE3O43900 615 aaPredicted RBP3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 PAPLNO95428 1278 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 CTSHP09668 335 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 BCKDHBP21953 392 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 STAT3P40763 770 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 MLLT10P55197 1068 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 YBX1P67809 324 aaKnown RBP3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 BRDTQ58F21 947 aaPredicted RBP3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 WDR44Q5JSH3 913 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 FBXL19Q6PCT2 694 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 KIAA1211Q6ZU35 1233 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 ARMCX6Q7L4S7 300 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 FBXO33Q7Z6M2 555 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 BIVMQ86UB2 503 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 HEATR4Q86WZ0 1026 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 FBXO16Q8IX29 292 aaPredicted RBP3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 CPT1CQ8TCG5 803 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 ACER1Q8TDN7 264 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 TMEM158Q8WZ71 300 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 PHKBQ93100 1093 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 TCTN2Q96GX1 697 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 ZNF578Q96N58 590 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms