RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 TTC17Q96AE7 1141 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 NACC2Q96BF6 587 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 MIEF2Q96C03 454 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 CHMP4CQ96CF2 233 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 SHISA4Q96DD7 197 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 VWCEQ96DN2 955 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 CHFRQ96EP1 664 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 PKNOX2Q96KN3 472 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 RHOVQ96L33 236 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 C16orf92Q96LL3 132 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 TBATAQ96M53 351 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 TTC14Q96N46 770 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 NEUROD6Q96NK8 337 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 FCRL3Q96P31 734 aaPredicted RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 LRRC37BQ96QE4 947 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 OR14A2Q96R54 314 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 DCLRE1CQ96SD1 692 aaKnown RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 STRBPQ96SI9 672 aaKnown RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 CDC5LQ99459 802 aaKnown RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 CDC6Q99741 560 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 ELAC2Q9BQ52 826 aaKnown RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 SH2D3AQ9BRG2 576 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 DHRS4Q9BTZ2 278 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 G6PC3Q9BUM1 346 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 SELENOOQ9BVL4 669 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 SPATA5L1Q9BVQ7 753 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 SARGQ9BW04 601 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 SPATA9Q9BWV2 254 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 BRIP1Q9BX63 1249 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 MRPL4Q9BYD3 311 aaKnown RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 KRTAP4-4Q9BYR3 166 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 ASPSCR1Q9BZE9 553 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 INO80BQ9C086 356 aaPredicted RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 RSPH9Q9H1X1 276 aaPredicted RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 PPCSQ9HAB8 311 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 TCF7L1Q9HCS4 588 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC6A20Q9NP91 592 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 MAN1C1Q9NR34 630 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 CHST12Q9NRB3 414 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 AASDHPPTQ9NRN7 309 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 GPR27Q9NS67 375 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 CATSPERZQ9NTU4 200 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 CLDND1Q9NY35 253 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 OBP2AQ9NY56 170 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC5A4Q9NY91 659 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 WWOXQ9NZC7 414 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 UBP1Q9NZI7 540 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 HSPBP1Q9NZL4 362 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 RNF181Q9P0P0 153 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 CGGBP1Q9UFW8 167 aaPredicted RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 PGAP2Q9UHJ9 254 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 POLG2Q9UHN1 485 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 PFDN2Q9UHV9 154 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 TAGLN3Q9UI15 199 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZNF112Q9UJU3 913 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZNF180Q9UJW8 692 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 FBXO2Q9UK22 296 aaPredicted RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 ADAM29Q9UKF5 820 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 PACSIN3Q9UKS6 424 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 DSEQ9UL01 958 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 INTUQ9ULD6 942 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 FAM184BQ9ULE4 1060 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 PNMA8BQ9ULN7 279 aaPredicted RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 GTF2A1LQ9UNN4 478 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZFR2Q9UPR6 939 aaKnown RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 LZTS1Q9Y250 596 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 ANKRD6Q9Y2G4 727 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 LUC7L2Q9Y383 392 aaKnown RBP0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 INSL6Q9Y581 213 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 CORINQ9Y5Q5 1042 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC4A7Q9Y6M7 1214 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 X6R8D5 127 aa0.71□□□□□ -2.3
RNU4-54P-201ENST00000516428 WASHC2AQ641Q2 1341 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 TRBV23-1A0A0A0MS06 115 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 ST20-MTHFSA0A0A6YYL1 179 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 TRAV20A0A0B4J274 112 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 A0A0G2JNJ9 132 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 A0A1W2PQH9 124 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 hCG_1642624A0A1W2PR95 340 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 SHISA3A0PJX4 238 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 FAM170AA1A519 330 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 KLRG2A4D1S0 409 aaPredicted RBP0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 MYMKA6NI61 221 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 RASSF10A6NK89 507 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZAR1LA6NP61 321 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 VSTM5A8MXK1 200 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 C9IYK1 514 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 NPIPB8E9PQR5 432 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 F6X3S4 739 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 H0Y8X5 98 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 K7ESF4 209 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 ARHGAP6O43182 974 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 GPR39O43194 453 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 EPB41L2O43491 1005 aaKnown RBP0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC26A4O43511 780 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 ADCY3O60266 1144 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 ABLIM3O94929 683 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 FSBPO95073 299 aa0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 SNUPNO95149 360 aaKnown RBP0.7□□□□□ -2.3
RNU4-54P-201ENST00000516428 BMP15O95972 392 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms