RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 GALNT8Q9NY28 637 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MTMR4Q9NYA4 1195 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SAMD15Q9P1V8 674 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SLC23A1Q9UHI7 598 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 OAZ3Q9UMX2 235 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SRPK3Q9UPE1 567 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MSRB2Q9Y3D2 182 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TSC22D4Q9Y3Q8 395 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PCDHGA9Q9Y5G4 932 aaKnown RBP0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PCDHGA8Q9Y5G5 932 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PCDHGA7Q9Y5G6 932 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PCDHGA6Q9Y5G7 932 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PCDHGA3Q9Y5H0 932 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PCDHGA2Q9Y5H1 932 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ACTL7AQ9Y615 435 aa0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MRPL42Q9Y6G3 142 aaKnown RBP0.57□□□□□ -2.32
RNU6-1049P-201ENST00000516414 A0A087X0B3 334 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 A0A087X1B8 175 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CAPN14A8MX76 684 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 RFXAPO00287 272 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MUSKO15146 869 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 FOXN1O15353 648 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 FOXP2O15409 715 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 HOXA3O43365 443 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 IGSF3O75054 1194 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TMEM127O75204 238 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 VPS4BO75351 444 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PRPF6O94906 941 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 FBXO21O94952 628 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SCAF4O95104 1147 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SPDEFO95238 335 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LY86O95711 162 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 NUDT3O95989 172 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 RHOP08100 348 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GAAP10253 952 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CYP19A1P11511 503 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PLA2G2AP14555 144 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TCF3P15923 654 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 COMTP21964 271 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PTGS1P23219 599 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 EDNRBP24530 442 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 POLD1P28340 1107 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 HOXA11P31270 313 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SREBF1P36956 1147 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ZEB1P37275 1124 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ADCYAP1R1P41586 468 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ABCG1P45844 678 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TOB1P50616 345 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LGALS4P56470 323 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GPR85P60893 370 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 RAP2BP61225 183 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LACTBP83111 547 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SRSF2Q01130 221 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 EXOSC10Q01780 885 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 NHLH2Q02577 135 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TFF2Q03403 129 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ARID5AQ03989 594 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MGAT5Q09328 741 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 IFRD2Q12894 506 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 RESTQ13127 1097 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PAK1Q13153 545 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PABPC4Q13310 644 aaKnown RBP eCLIP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 FAM50AQ14320 339 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 EIF4HQ15056 248 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PCBP2Q15366 365 aaKnown RBP eCLIP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 STILQ15468 1287 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ELAVL1Q15717 326 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LY6KQ17RY6 165 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KRTAP19-4Q3LI73 84 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CD300EQ496F6 205 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 EMC4Q5J8M3 183 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MIIPQ5JXC2 388 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PRAMEF14Q5SWL7 426 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MROH9Q5TGP6 573 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 BROXQ5VW32 411 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PRAMEF9Q5VWM5 478 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TSHZ3Q63HK5 1081 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CCDC62Q6P9F0 684 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GIMAP6Q6P9H5 292 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SLC2A7Q6PXP3 512 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 FAM111BQ6SJ93 734 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ZNF782Q6ZMW2 699 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 DBX2Q6ZNG2 339 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KRTAP5-5Q701N2 237 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 USP30Q70CQ3 517 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 C16orf59Q7L2K0 433 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 AMIGO2Q86SJ2 522 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CLEC14AQ86T13 490 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PEG10Q86TG7 708 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MTDHQ86UE4 582 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ZNF575Q86XF7 245 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ZC3H7AQ8IWR0 971 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SCUBE1Q8IWY4 988 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 IFNL3Q8IZI9 196 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LGI4Q8N135 537 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 NLGN1Q8N2Q7 840 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KIAA1958Q8N8K9 716 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 Q8NA96 180 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 NETO2Q8NC67 525 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GSTCDQ8NEC7 633 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms