RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 KIAA1841Q6NSI8 718 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 ZDHHC14Q8IZN3 488 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 VPS52Q8N1B4 723 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 PLCD3Q8N3E9 789 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 RSPH1Q8WYR4 309 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 ZBP1Q9H171 429 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 SMOC2Q9H3U7 446 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 CHST12Q9NRB3 414 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
LMNA-223ENST00000515459 USTQ9Y2C2 406 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 IRAK3Q9Y616 596 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 CARNS1A5YM72 827 aa17.77■□□□□ 0.44
LMNA-223ENST00000515459 ZC3H11AO75152 810 aaKnown RBP eCLIP17.77■□□□□ 0.44
LMNA-223ENST00000515459 NBL1P41271 181 aa17.77■□□□□ 0.44
LMNA-223ENST00000515459 CDC42EP1Q00587 391 aa17.77■□□□□ 0.44
LMNA-223ENST00000515459 TSGA10IPQ3SY00 556 aa17.77■□□□□ 0.44
LMNA-223ENST00000515459 ASTLQ6HA08 431 aaPredicted RBP17.77■□□□□ 0.44
LMNA-223ENST00000515459 C12orf76Q8N812 135 aaPredicted RBP17.77■□□□□ 0.44
LMNA-223ENST00000515459 LENG9Q96B70 501 aa17.77■□□□□ 0.44
LMNA-223ENST00000515459 MFSD1Q9H3U5 465 aa17.77■□□□□ 0.44
LMNA-223ENST00000515459 LIMD1Q9UGP4 676 aa17.77■□□□□ 0.44
LMNA-223ENST00000515459 DENND4AQ7Z401 1863 aa17.77■□□□□ 0.43
LMNA-223ENST00000515459 CSDE1O75534 798 aaKnown RBP17.76■□□□□ 0.43
LMNA-223ENST00000515459 CTSAP10619 480 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 EPCAMP16422 314 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 SFNP31947 248 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 PHKA2P46019 1235 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 POLGP54098 1239 aaPredicted RBP17.76■□□□□ 0.43
LMNA-223ENST00000515459 FGD1P98174 961 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 FOXK2Q01167 660 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 KRT32Q14532 448 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 ASCL5Q7RTU5 278 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 DDX53Q86TM3 631 aaKnown RBP17.76■□□□□ 0.43
LMNA-223ENST00000515459 TMEM173Q86WV6 379 aaPredicted RBP17.76■□□□□ 0.43
LMNA-223ENST00000515459 RASEFQ8IZ41 740 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 BICD2Q8TD16 824 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 AUTS2Q8WXX7 1259 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 RIT2Q99578 217 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 TRAIPQ9BWF2 469 aa17.76■□□□□ 0.43
LMNA-223ENST00000515459 GCOM2Q9BZD3 368 aaPredicted RBP17.76■□□□□ 0.43
LMNA-223ENST00000515459 CFAP54Q96N23 3096 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 PRR23AA6NEV1 266 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 MSH4O15457 936 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 PRPF3O43395 683 aaKnown RBP17.75■□□□□ 0.43
LMNA-223ENST00000515459 CHMP2AO43633 222 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 GAS7O60861 476 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 HMGB1P09429 215 aaKnown RBP17.75■□□□□ 0.43
LMNA-223ENST00000515459 SKIP12755 728 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 SFPQP23246 707 aaKnown RBP eCLIP17.75■□□□□ 0.43
LMNA-223ENST00000515459 CLCN5P51795 746 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 JAK3P52333 1124 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 UGCGQ16739 394 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 TWF2Q6IBS0 349 aaKnown RBP17.75■□□□□ 0.43
LMNA-223ENST00000515459 KANK3Q6NY19 840 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 IGSF21Q96ID5 467 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 MYO15AQ9UKN7 3530 aa17.75■□□□□ 0.43
LMNA-223ENST00000515459 DNM2P50570 870 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 IRX6P78412 446 aaPredicted RBP17.74■□□□□ 0.43
LMNA-223ENST00000515459 AKAP17AQ02040 695 aaKnown RBP17.74■□□□□ 0.43
LMNA-223ENST00000515459 DRP2Q13474 957 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 TARBP2Q15633 366 aaKnown RBP17.74■□□□□ 0.43
LMNA-223ENST00000515459 LRCH2Q5VUJ6 765 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 GLB1LQ6UWU2 654 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 CABP7Q86V35 215 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 CCDC148Q8NFR7 591 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 SLC22A17Q8WUG5 538 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 SLC5A5Q92911 643 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 LPPQ93052 612 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 CCDC136Q96JN2 1154 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 TEKT3Q9BXF9 490 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 CYP26B1Q9NR63 512 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 TBC1D13Q9NVG8 400 aa17.74■□□□□ 0.43
LMNA-223ENST00000515459 SEPT9Q9UHD8 586 aaPredicted RBP17.74■□□□□ 0.43
LMNA-223ENST00000515459 GALTP07902 379 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 USP11P51784 963 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 RNASELQ05823 741 aaKnown RBP17.73■□□□□ 0.43
LMNA-223ENST00000515459 LONRF3Q496Y0 759 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 MTERF2Q49AM1 385 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 NOMO2Q5JPE7 1267 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 TMC5Q6UXY8 1006 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 PPFIBP1Q86W92 1011 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 ACSF2Q96CM8 615 aaPredicted RBP17.73■□□□□ 0.43
LMNA-223ENST00000515459 NIFKQ9BYG3 293 aaKnown RBP17.73■□□□□ 0.43
LMNA-223ENST00000515459 INO80BQ9C086 356 aaPredicted RBP17.73■□□□□ 0.43
LMNA-223ENST00000515459 UNC45AQ9H3U1 944 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 NRDE2Q9H7Z3 1164 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 SFXN1Q9H9B4 322 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 PIN4Q9Y237 131 aaKnown RBP17.73■□□□□ 0.43
LMNA-223ENST00000515459 INPP5FQ9Y2H2 1132 aa17.73■□□□□ 0.43
LMNA-223ENST00000515459 NID2Q14112 1375 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 A0A087WZ62 844 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 SPDYE4A6NLX3 237 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 RAB27AP51159 221 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 XKR3Q5GH77 459 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 BMP2KLQ5H9B9 411 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 CCDC149Q6ZUS6 474 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 MIER3Q7Z3K6 550 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 GPR149Q86SP6 731 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 ZNF410Q86VK4 478 aa17.72■□□□□ 0.43
LMNA-223ENST00000515459 FLCNQ8NFG4 579 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms