RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ECHDC2Q86YB7 292 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 MYLK4Q86YV6 388 aaPredicted RBP13.81□□□□□ -0.2
SMAD1-215ENST00000515385 NCSTNQ92542 709 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 HPS3Q969F9 1004 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 TGS1Q96RS0 853 aaKnown RBP13.81□□□□□ -0.2
SMAD1-215ENST00000515385 DDX23Q9BUQ8 820 aaKnown RBP13.81□□□□□ -0.2
SMAD1-215ENST00000515385 BRIP1Q9BX63 1249 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 GRHL1Q9NZI5 618 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 SNX24Q9Y343 169 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 USH1CQ9Y6N9 552 aa13.81□□□□□ -0.2
SMAD1-215ENST00000515385 MYMKA6NI61 221 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 EIF4E1BA6NMX2 242 aaKnown RBP13.8□□□□□ -0.2
SMAD1-215ENST00000515385 TRAF5O00463 557 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 UPP2O95045 317 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 KCNA6P17658 529 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 NT5C2P49902 561 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 STRN3Q13033 797 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 INF2Q27J81 1249 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 PPP1R21Q6ZMI0 780 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 LONP2Q86WA8 852 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 LRRC8CQ8TDW0 803 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 FAM89AQ96GI7 184 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 TLE6Q9H808 572 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 PCYOX1Q9UHG3 505 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 STARD13Q9Y3M8 1113 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 TNS3Q68CZ2 1445 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 ARAP2Q8WZ64 1704 aa13.8□□□□□ -0.2
SMAD1-215ENST00000515385 ADAMTS3O15072 1205 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 MAP3K13O43283 966 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 PHF2O75151 1096 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 GGPS1O95749 300 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 TPP2P29144 1249 aaPredicted RBP13.79□□□□□ -0.2
SMAD1-215ENST00000515385 STX2P32856 288 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 CTSWP56202 376 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 LRRC14Q15048 493 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 VSTM1Q6UX27 236 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 CYFIP1Q7L576 1253 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 KRT25Q7Z3Z0 450 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 LARP4BQ92615 738 aaKnown RBP13.79□□□□□ -0.2
SMAD1-215ENST00000515385 AZIN2Q96A70 460 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 NR1H4Q96RI1 486 aaPredicted RBP13.79□□□□□ -0.2
SMAD1-215ENST00000515385 GOLPH3Q9H4A6 298 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 GREM2Q9H772 168 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 DBR1Q9UK59 544 aaKnown RBP13.79□□□□□ -0.2
SMAD1-215ENST00000515385 MAGEB6P1A0A0J9YX57 407 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 SIGLEC16A6NMB1 481 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 DDX3YO15523 660 aaKnown RBP13.79□□□□□ -0.2
SMAD1-215ENST00000515385 PTGIRP43119 386 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 CACNA2D1P54289 1103 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 MGAT5Q09328 741 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 HLFQ16534 295 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 PABPC1LQ4VXU2 614 aaKnown RBP13.79□□□□□ -0.2
SMAD1-215ENST00000515385 MGARPQ8TDB4 240 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 LRRC37BQ96QE4 947 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 MYLK2Q9H1R3 596 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 NMRK1Q9NWW6 199 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 NLRP2Q9NX02 1062 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 NKIRAS1Q9NYS0 192 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 ACTL7BQ9Y614 415 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 GMEB1Q9Y692 573 aa13.79□□□□□ -0.2
SMAD1-215ENST00000515385 NCANO14594 1321 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 CYP27B1O15528 508 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 SLCO1A2P46721 670 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 CCDC6Q16204 474 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 DBN1Q16643 649 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 SOGA3Q5TF21 947 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 ANKLE1Q8NAG6 615 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 PPFIBP2Q8ND30 876 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 SLC17A8Q8NDX2 589 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 CDK5RAP3Q96JB5 506 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 NDNQ99608 321 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 TBC1D10AQ9BXI6 508 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 PITPNM3Q9BZ71 974 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 KCNK9Q9NPC2 374 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 BLOC1S4Q9NUP1 217 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 NUB1Q9Y5A7 615 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 ATAD5Q96QE3 1844 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 TCEA3O75764 348 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 TJP3O95049 919 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 TTLL1O95922 423 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 GM2AP17900 193 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 KCNA3P22001 575 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 CYP7A1P22680 504 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 MARK3P27448 753 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 GSTT1P30711 240 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 IL9RQ01113 521 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 RCN2Q14257 317 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
SMAD1-215ENST00000515385 SH2D4BQ5SQS7 431 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 CGB2Q6NT52 195 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 ZC3H3Q8IXZ2 948 aaKnown RBP13.78□□□□□ -0.2
SMAD1-215ENST00000515385 MIGA1Q8NAN2 632 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 RASGRP4Q8TDF6 673 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 GATA6Q92908 595 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 ART4Q93070 314 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 MIS12Q9H081 205 aa13.78□□□□□ -0.2
SMAD1-215ENST00000515385 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms