RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SFI1A8K8P3 1242 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 SCP2P22307 547 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 GPC3P51654 580 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 MRPS6P82932 125 aaKnown RBP23.19■■□□□ 1.3
LSM6-207ENST00000515311 COASYQ13057 564 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 CAPSQ13938 189 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 KCNB1Q14721 858 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 ODR4Q5SWX8 454 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 ZNF410Q86VK4 478 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 MYCT1Q8N699 235 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 BSNDQ8WZ55 320 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 RMND1Q9NWS8 449 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 PCDHA5Q9Y5H7 936 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 TANC1Q9C0D5 1861 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 SIP14410 1827 aa23.19■■□□□ 1.3
LSM6-207ENST00000515311 PITPNM1O00562 1244 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 GPR32O75388 356 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 MAPTP10636 758 aaKnown RBP23.18■■□□□ 1.3
LSM6-207ENST00000515311 THPOP40225 353 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 NPTX2P47972 431 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 SARSP49591 514 aaKnown RBP23.18■■□□□ 1.3
LSM6-207ENST00000515311 PEX3P56589 373 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 BFSP2Q13515 415 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 HERC4Q5GLZ8 1057 aaPredicted RBP23.18■■□□□ 1.3
LSM6-207ENST00000515311 CAVIN1Q6NZI2 390 aaKnown RBP23.18■■□□□ 1.3
LSM6-207ENST00000515311 RBM43Q6ZSC3 357 aaKnown RBP23.18■■□□□ 1.3
LSM6-207ENST00000515311 SFR1Q86XK3 245 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 KSR1Q8IVT5 923 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 SLC17A8Q8NDX2 589 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 NFKBIZQ9BYH8 718 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 ADAMTS10Q9H324 1103 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 EXOC1Q9NV70 894 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 TMEM63CQ9P1W3 806 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 KIAA1468Q9P260 1216 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 TBX21Q9UL17 535 aa23.18■■□□□ 1.3
LSM6-207ENST00000515311 M0QZ92 97 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 RHOBTB3O94955 611 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 CLTBP09497 229 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 CKBP12277 381 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 SMTNP53814 917 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 NLRP11P59045 1033 aaKnown RBP23.17■■□□□ 1.3
LSM6-207ENST00000515311 PSMD2Q13200 908 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 KMT5BQ4FZB7 885 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 FAM26DQ5JW98 314 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 IFNLR1Q8IU57 520 aaPredicted RBP23.17■■□□□ 1.3
LSM6-207ENST00000515311 FAM178BQ8IXR5 827 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 RNF149Q8NC42 400 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 KCNN1Q92952 543 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 NLRP4Q96MN2 994 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 HTATIP2Q9BUP3 242 aa23.17■■□□□ 1.3
LSM6-207ENST00000515311 LRRIQ4A6NIV6 560 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 H0YCG3 227 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 SRGAP2CP0DJJ0 459 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 ABCD1P33897 745 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 PHKA2P46019 1235 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 CRYBB1P53674 252 aaPredicted RBP23.16■■□□□ 1.3
LSM6-207ENST00000515311 NCKAP1LP55160 1127 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 MGAT3Q09327 533 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 TMEM62Q0P6H9 643 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 KIZQ2M2Z5 673 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 FAM26FQ5R3K3 315 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 CDCA2Q69YH5 1023 aaPredicted RBP23.16■■□□□ 1.3
LSM6-207ENST00000515311 NLRP7Q8WX94 980 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 ERCC4Q92889 916 aaPredicted RBP23.16■■□□□ 1.3
LSM6-207ENST00000515311 FIZ1Q96SL8 496 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 NOC4LQ9BVI4 516 aaKnown RBP23.16■■□□□ 1.3
LSM6-207ENST00000515311 CELF4Q9BZC1 486 aaKnown RBP23.16■■□□□ 1.3
LSM6-207ENST00000515311 GTPBP4Q9BZE4 634 aaKnown RBP23.16■■□□□ 1.3
LSM6-207ENST00000515311 C2orf40Q9H1Z8 148 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 KMT5AQ9NQR1 393 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 TRPV2Q9Y5S1 764 aa23.16■■□□□ 1.3
LSM6-207ENST00000515311 PHLPP2Q6ZVD8 1323 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 CCDC169A6NNP5 214 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 EFNA5P52803 228 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 PTENP60484 403 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 DEPTORQ8TB45 409 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 SCLT1Q96NL6 688 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 HIPK3Q9H422 1215 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 ST6GALNAC4Q9H4F1 302 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 IFT122Q9HBG6 1241 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 TMEM39AQ9NV64 488 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 ARHGAP28Q9P2N2 729 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 CDY2AQ9Y6F7 541 aa23.15■■□□□ 1.3
LSM6-207ENST00000515311 MKI67P46013 3256 aaKnown RBP23.15■■□□□ 1.3
LSM6-207ENST00000515311 ADGRA3Q8IWK6 1321 aa23.14■■□□□ 1.3
LSM6-207ENST00000515311 A0A087WZ62 844 aa23.14■■□□□ 1.29
LSM6-207ENST00000515311 CHRNA1P02708 482 aa23.14■■□□□ 1.29
LSM6-207ENST00000515311 SELPP16109 830 aa23.14■■□□□ 1.29
LSM6-207ENST00000515311 ALCAMQ13740 583 aa23.14■■□□□ 1.29
LSM6-207ENST00000515311 ZNF618Q5T7W0 954 aa23.14■■□□□ 1.29
LSM6-207ENST00000515311 ZBTB8OSQ8IWT0 167 aa23.14■■□□□ 1.29
LSM6-207ENST00000515311 TRIML1Q8N9V2 468 aa23.14■■□□□ 1.29
LSM6-207ENST00000515311 TMEM161BQ8NDZ6 487 aa23.14■■□□□ 1.29
LSM6-207ENST00000515311 FDXACB1Q9BRP7 624 aaPredicted RBP23.14■■□□□ 1.29
LSM6-207ENST00000515311 GCOM2Q9BZD3 368 aaPredicted RBP23.14■■□□□ 1.29
LSM6-207ENST00000515311 MRPL44Q9H9J2 332 aaKnown RBP23.14■■□□□ 1.29
LSM6-207ENST00000515311 KIAA0355O15063 1070 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 SLC16A4O15374 487 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 CTSHP09668 335 aa23.13■■□□□ 1.29
LSM6-207ENST00000515311 TRAF7Q6Q0C0 670 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms