RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 EIF4BP23588 611 aaKnown RBP13.44□□□□□ -0.26
CSF1R-208ENST00000515239 ZBTB44Q8NCP5 570 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 CHAMP1Q96JM3 812 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 RHOBTB2Q9BYZ6 727 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 NRDE2Q9H7Z3 1164 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 AGO4Q9HCK5 861 aaKnown RBP13.44□□□□□ -0.26
CSF1R-208ENST00000515239 SLC2A4RGQ9NR83 387 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 DOCK8Q8NF50 2099 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 CCDC195A0A1B0GUA6 201 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 LAMP2P13473 410 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 COL9A2Q14055 689 aaPredicted RBP13.43□□□□□ -0.26
CSF1R-208ENST00000515239 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 SWSAP1Q6NVH7 229 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 PDXDC2PQ6P474 469 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 ATRIPQ8WXE1 791 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 STAMQ92783 540 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 NELL1Q92832 810 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 ZNF302Q9NR11 478 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 TBC1D13Q9NVG8 400 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 PCDHGA2Q9Y5H1 932 aa13.43□□□□□ -0.26
CSF1R-208ENST00000515239 ERICH2A1L162 156 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 CARNS1A5YM72 827 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 ANHXE9PGG2 379 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 MEIS1O00470 390 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 DHX15O43143 795 aaKnown RBP13.42□□□□□ -0.26
CSF1R-208ENST00000515239 LILRB5O75023 590 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 SLC11A1P49279 550 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 CLCN3P51790 818 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 CSTF1Q05048 431 aaKnown RBP13.42□□□□□ -0.26
CSF1R-208ENST00000515239 CEP55Q53EZ4 464 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 ERICH6BQ5W0A0 696 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 CYP26C1Q6V0L0 522 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 CATIPQ7Z7H3 387 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 IGDCC4Q8TDY8 1250 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 BBXQ8WY36 941 aaPredicted RBP13.42□□□□□ -0.26
CSF1R-208ENST00000515239 ZNF668Q96K58 619 aaPredicted RBP13.42□□□□□ -0.26
CSF1R-208ENST00000515239 MAP3K14Q99558 947 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 RPP25Q9BUL9 199 aaKnown RBP13.42□□□□□ -0.26
CSF1R-208ENST00000515239 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
CSF1R-208ENST00000515239 EMILIN2Q9BXX0 1053 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 EPC1Q9H2F5 836 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 PARD6AQ9NPB6 346 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 DNAJB4Q9UDY4 337 aa13.42□□□□□ -0.26
CSF1R-208ENST00000515239 SEC63Q9UGP8 760 aaKnown RBP13.42□□□□□ -0.26
CSF1R-208ENST00000515239 SMG5Q9UPR3 1016 aaKnown RBP13.42□□□□□ -0.26
CSF1R-208ENST00000515239 MTF2Q9Y483 593 aaPredicted RBP13.42□□□□□ -0.26
CSF1R-208ENST00000515239 CLUHO75153 1309 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 LAMTOR5O43504 91 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 B4GALT3O60512 393 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 PAPLNO95428 1278 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 SSBP05455 408 aaKnown RBP eCLIP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 DARSP14868 501 aaKnown RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 FGFR4P22455 802 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 TRDNQ13061 729 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 HTR4Q13639 388 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 COL9A3Q14050 684 aaPredicted RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 EFCAB12Q6NXP0 572 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 ZNF280BQ86YH2 543 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 CMTR1Q8N1G2 835 aaKnown RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 SRBD1Q8N5C6 995 aaKnown RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 ST13P5Q8NFI4 369 aaPredicted RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 LPPQ93052 612 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 SECISBP2LQ93073 1101 aaKnown RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 ZNF707Q96C28 371 aaPredicted RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 SHDQ96IW2 340 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 TRAIPQ9BWF2 469 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 IL25Q9H293 177 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 MAN1C1Q9NR34 630 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 DIAPH3Q9NSV4 1193 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 SPATA6Q9NWH7 488 aaPredicted RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 ZSCAN32Q9NX65 697 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 AKT3Q9Y243 479 aa13.41□□□□□ -0.26
CSF1R-208ENST00000515239 MAFBQ9Y5Q3 323 aaPredicted RBP13.41□□□□□ -0.26
CSF1R-208ENST00000515239 KANSL1LA0AUZ9 987 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 MEIS3P2A8K0S8 358 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 INPPL1O15357 1258 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 MAGEB2O15479 319 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 CSDE1O75534 798 aaKnown RBP13.4□□□□□ -0.26
CSF1R-208ENST00000515239 OFD1O75665 1012 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 RFPL2O75678 378 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 PLEKHA8P1O95397 391 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 MYBP10242 640 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 PHKA2P46019 1235 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 GPC5P78333 572 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 LONRF3Q496Y0 759 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 NOMO2Q5JPE7 1267 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 PPM1JQ5JR12 505 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 MIS18BP1Q6P0N0 1132 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 TRMT1LQ7Z2T5 733 aaKnown RBP13.4□□□□□ -0.26
CSF1R-208ENST00000515239 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 LRRC71Q8N4P6 559 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 RSPH1Q8WYR4 309 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 LZTS2Q9BRK4 669 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 MYL10Q9BUA6 226 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 BCO2Q9BYV7 579 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
CSF1R-208ENST00000515239 DACT1Q9NYF0 836 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms