RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SENP7Q9BQF6 1050 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 ZNF287Q9HBT7 754 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 SEPT10Q9P0V9 454 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 HESX1Q9UBX0 185 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 EIF4E1BA6NMX2 242 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 PPEF1O14829 653 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 NAPAP54920 295 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 CTAG1AP78358 180 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 CLEC10AQ8IUN9 316 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 SP8Q8IXZ3 490 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 PPP2R3CQ969Q6 453 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 EIF2AQ9BY44 585 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 LZTFL1Q9NQ48 299 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 ATAD3AQ9NVI7 634 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 RMND1Q9NWS8 449 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 TRPC5Q9UL62 973 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 PSME4Q14997 1843 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 SMCO2A6NFE2 343 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 KCNJ18B7U540 433 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 RHOBTB3O94955 611 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 AKR1B1P15121 316 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 COPB1P53618 953 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 USP46P62068 366 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 ERVK-24P63145 666 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 GTF2IP78347 998 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 CDK17Q00537 523 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 KCNJ12Q14500 433 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 CRY1Q16526 586 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 TXNRD1Q16881 649 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 OSTM1Q86WC4 334 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 RELL1Q8IUW5 271 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 GIMAP8Q8ND71 665 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 PLIN2Q99541 437 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 MTMR4Q9NYA4 1195 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 ADGRG1Q9Y653 693 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 ESYT2A0FGR8 921 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 TFRCP02786 760 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 OR52Z1P0C646 297 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 TXLNAP40222 546 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 IRAK1P51617 712 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 IGBP1P78318 339 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 GSTM4Q03013 218 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 ZBTB17Q13105 803 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 GRAMD4Q6IC98 578 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 KRT25Q7Z3Z0 450 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 FUKQ8N0W3 1084 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 GDAP1Q8TB36 358 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 ANKRD49Q8WVL7 239 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 RABGGTAQ92696 567 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 ASIC4Q96FT7 647 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 RPGRIP1Q96KN7 1286 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 ZNF570Q96NI8 536 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 FNBP1Q96RU3 617 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 MXD3Q9BW11 206 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 NAA15Q9BXJ9 866 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 TANGO6Q9C0B7 1094 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 EBF2Q9HAK2 575 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 TMEM260Q9NX78 707 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 DCAF16Q9NXF7 216 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 TAB2Q9NYJ8 693 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 BAIAP2L1Q9UHR4 511 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 MTUS1Q9ULD2 1270 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 ATAD5Q96QE3 1844 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 FRMPD2Q68DX3 1309 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 TNS1Q9HBL0 1735 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 N4BP3O15049 544 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 TTI1O43156 1089 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 MGRN1O60291 552 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 TBC1D12O60347 775 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 CCNT1O60563 726 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 RPL17P18621 184 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 PLCG1P19174 1290 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 NONOQ15233 471 aaKnown RBP eCLIP8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 LETM2Q2VYF4 491 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 APLFQ8IW19 511 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 GOLGA1Q92805 767 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 LRRC45Q96CN5 670 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 RRP36Q96EU6 259 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 MTMR9Q96QG7 549 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 VPS16Q9H269 839 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 INIPQ9NRY2 104 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 ABHD10Q9NUJ1 306 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 SLC45A1Q9Y2W3 748 aa8.06□□□□□ -1.12
PDLIM5-219ENST00000514743 DPPA5A6NC42 116 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 C6orf229H3BNL8 230 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 RIMBP2O15034 1052 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SHOX2O60902 331 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 PPP1R11O60927 126 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 MTTPP55157 894 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 PPP2R3AQ06190 1150 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 PICALMQ13492 652 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 USH1GQ495M9 461 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 TTI2Q6NXR4 508 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 NEK8Q86SG6 692 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SYT2Q8N9I0 419 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 ZNF507Q8TCN5 953 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 TBCKQ8TEA7 893 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 SH3TC2Q8TF17 1288 aa8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 ABTB1Q969K4 478 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-219ENST00000514743 AK8Q96MA6 479 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms