RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 OATP04181 439 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 SARSP49591 514 aaKnown RBP11.06□□□□□ -0.64
CCL28-203ENST00000513525 MRE11P49959 708 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 CRYBB1P53674 252 aaPredicted RBP11.06□□□□□ -0.64
CCL28-203ENST00000513525 ZNF445P59923 1031 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 COL19A1Q14993 1142 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 NONOQ15233 471 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCL28-203ENST00000513525 TMEM266Q2M3C6 531 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 KRT25Q7Z3Z0 450 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 BANK1Q8NDB2 785 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 ETNPPLQ8TBG4 499 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 P2RX5Q93086 422 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 AIFM3Q96NN9 605 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 PHF20Q9BVI0 1012 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 UNC45AQ9H3U1 944 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 NSUN3Q9H649 340 aaKnown RBP11.06□□□□□ -0.64
CCL28-203ENST00000513525 CDHR5Q9HBB8 845 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 NRBP2Q9NSY0 501 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 NOC2LQ9Y3T9 749 aaKnown RBP11.06□□□□□ -0.64
CCL28-203ENST00000513525 C5orf42Q9H799 3197 aa11.06□□□□□ -0.64
CCL28-203ENST00000513525 VPS37CA5D8V6 355 aaPredicted RBP11.05□□□□□ -0.64
CCL28-203ENST00000513525 GPR182O15218 404 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 TDP2O95551 362 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 PRKCEQ02156 737 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 NFX1Q12986 1120 aaKnown RBP11.05□□□□□ -0.64
CCL28-203ENST00000513525 UGCGQ16739 394 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 KIZQ2M2Z5 673 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 LEXMQ3ZCV2 418 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 NAALADL2Q58DX5 795 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 FAM228AQ86W67 206 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 GPT2Q8TD30 523 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 SYAP1Q96A49 352 aaPredicted RBP11.05□□□□□ -0.64
CCL28-203ENST00000513525 RGS18Q9NS28 235 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 C1orf112Q9NSG2 853 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 ST3GAL5Q9UNP4 418 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 GINS2Q9Y248 185 aa11.05□□□□□ -0.64
CCL28-203ENST00000513525 C9IYK1 514 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 CHMP2AO43633 222 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 MGEA5O60502 916 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 MMP1P03956 469 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 VTNP04004 478 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 XBP1P17861 261 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 TMOD1P28289 359 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 TARBP2Q15633 366 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 PROX2Q3B8N5 592 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 EFCAB12Q6NXP0 572 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 SLC24A5Q71RS6 500 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 TRMT1LQ7Z2T5 733 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 MIER3Q7Z3K6 550 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 METTL13Q8N6R0 699 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 NSUN7Q8NE18 718 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 NEK9Q8TD19 979 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 PABPC5Q96DU9 382 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 NECAB3Q96P71 396 aaPredicted RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 MAP7D2Q96T17 732 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 OSMRQ99650 979 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 ADAM2Q99965 735 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 DDX25Q9UHL0 483 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 KCNJ14Q9UNX9 436 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 MRPL42Q9Y6G3 142 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 TDRD15B5MCY1 1934 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 DENND3A2RUS2 1198 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 GRM6O15303 877 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 NCK2O43639 380 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 CTDNEP1O95476 244 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 GCFC2P16383 781 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 CLCN3P51790 818 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 DSC3Q14574 896 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 INF2Q27J81 1249 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 TCEAL5Q5H9L2 206 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 PPP4R3AQ6IN85 833 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 CAVIN1Q6NZI2 390 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 GJA10Q969M2 543 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 ZFRQ96KR1 1074 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 CEP89Q96ST8 783 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 NIFKQ9BYG3 293 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 ADAMTS10Q9H324 1103 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 ZSCAN16Q9H4T2 348 aaPredicted RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 ELAC1Q9H777 363 aaKnown RBP11.04□□□□□ -0.64
CCL28-203ENST00000513525 KCNMB3Q9NPA1 279 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 LRFN2Q9ULH4 789 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 AKT3Q9Y243 479 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 PCDHB7Q9Y5E2 793 aa11.04□□□□□ -0.64
CCL28-203ENST00000513525 CCDC194A0A1B0GVG4 234 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 SLC37A4O43826 429 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 JAK2O60674 1132 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 STBD1O95210 358 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 KCNA5P22460 613 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 EIF4BP23588 611 aaKnown RBP11.03□□□□□ -0.64
CCL28-203ENST00000513525 GPC3P51654 580 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 NLRP11P59045 1033 aaKnown RBP11.03□□□□□ -0.64
CCL28-203ENST00000513525 UBE2HP62256 183 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 KRT85P78386 507 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 FAM189BP81408 668 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 TBC1D8BQ0IIM8 1120 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 PPP2R5CQ13362 524 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 PUS10Q3MIT2 529 aaKnown RBP11.03□□□□□ -0.64
CCL28-203ENST00000513525 ZSCAN23Q3MJ62 389 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 XKR3Q5GH77 459 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms