RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 ZNF410Q86VK4 478 aa21.38■■□□□ 1.01
MATR3-221ENST00000513121 XPNPEP1Q9NQW7 623 aa21.38■■□□□ 1.01
MATR3-221ENST00000513121 PCDHGC5Q9Y5F6 944 aa21.38■■□□□ 1.01
MATR3-221ENST00000513121 A0A0U1RQF3 1178 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 POTEMA6NI47 508 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 H3BQ06 376 aaPredicted RBP21.37■■□□□ 1.01
MATR3-221ENST00000513121 CD2BP2O95400 341 aaKnown RBP21.37■■□□□ 1.01
MATR3-221ENST00000513121 POLGP54098 1239 aaPredicted RBP21.37■■□□□ 1.01
MATR3-221ENST00000513121 HYAL1Q12794 435 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 LEXMQ3ZCV2 418 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 NAALADL2Q58DX5 795 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 RNF169Q8NCN4 708 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 NEK9Q8TD19 979 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 POF1BQ8WVV4 589 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 SLC7A3Q8WY07 619 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 JPH2Q9BR39 696 aaPredicted RBP21.37■■□□□ 1.01
MATR3-221ENST00000513121 TMEM117Q9H0C3 514 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 MINDY3Q9H8M7 445 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 COL4A3BPQ9Y5P4 624 aa21.37■■□□□ 1.01
MATR3-221ENST00000513121 LYPLA2O95372 231 aa21.36■■□□□ 1.01
MATR3-221ENST00000513121 SRGAP2CP0DJJ0 459 aa21.36■■□□□ 1.01
MATR3-221ENST00000513121 SPATA31C1P0DKV0 1188 aa21.36■■□□□ 1.01
MATR3-221ENST00000513121 LTBRP36941 435 aa21.36■■□□□ 1.01
MATR3-221ENST00000513121 RFC5P40937 340 aa21.36■■□□□ 1.01
MATR3-221ENST00000513121 HMGN5P82970 282 aaKnown RBP21.36■■□□□ 1.01
MATR3-221ENST00000513121 LAMTOR4Q0VGL1 99 aa21.36■■□□□ 1.01
MATR3-221ENST00000513121 EMC2Q15006 297 aa21.36■■□□□ 1.01
MATR3-221ENST00000513121 RABEP1Q15276 862 aa21.36■■□□□ 1.01
MATR3-221ENST00000513121 SPOUT1Q5T280 376 aaKnown RBP21.36■■□□□ 1.01
MATR3-221ENST00000513121 OTUD6AQ7L8S5 288 aa21.36■■□□□ 1.01
MATR3-221ENST00000513121 PABPC5Q96DU9 382 aaKnown RBP21.36■■□□□ 1.01
MATR3-221ENST00000513121 FOXP1Q9H334 677 aaPredicted RBP21.36■■□□□ 1.01
MATR3-221ENST00000513121 DLX2Q07687 328 aaPredicted RBP21.35■■□□□ 1.01
MATR3-221ENST00000513121 NBR1Q14596 966 aa21.35■■□□□ 1.01
MATR3-221ENST00000513121 LONRF3Q496Y0 759 aa21.35■■□□□ 1.01
MATR3-221ENST00000513121 ADGRD2Q7Z7M1 963 aa21.35■■□□□ 1.01
MATR3-221ENST00000513121 FAM184AQ8NB25 1140 aa21.35■■□□□ 1.01
MATR3-221ENST00000513121 COLGALT1Q8NBJ5 622 aa21.35■■□□□ 1.01
MATR3-221ENST00000513121 PIGOQ8TEQ8 1089 aa21.35■■□□□ 1.01
MATR3-221ENST00000513121 CHST12Q9NRB3 414 aa21.35■■□□□ 1.01
MATR3-221ENST00000513121 RNF216Q9NWF9 866 aaPredicted RBP21.35■■□□□ 1.01
MATR3-221ENST00000513121 PPME1Q9Y570 386 aa21.35■■□□□ 1.01
MATR3-221ENST00000513121 TCF20Q9UGU0 1960 aaKnown RBP21.35■■□□□ 1.01
MATR3-221ENST00000513121 BDP1A6H8Y1 2624 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 MEIS3P2A8K0S8 358 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 LINC01565O15544 149 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 IL9P15248 144 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 SFPQP23246 707 aaKnown RBP eCLIP21.34■■□□□ 1.012e-6■■□□□ 12.5
MATR3-221ENST00000513121 PBX3P40426 434 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 PHKA2P46019 1235 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 CTC1Q2NKJ3 1217 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 EP400NLQ6ZTU2 488 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 CATSPER4Q7RTX7 472 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 FERMT3Q86UX7 667 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 C4orf32Q8N8J7 132 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 HELQQ8TDG4 1101 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 PSPC1Q8WXF1 523 aaKnown RBP21.34■■□□□ 1.01
MATR3-221ENST00000513121 LPPQ93052 612 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 IGFLR1Q9H665 355 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 CD320Q9NPF0 282 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 CLDND1Q9NY35 253 aa21.34■■□□□ 1.01
MATR3-221ENST00000513121 PIN4Q9Y237 131 aaKnown RBP21.34■■□□□ 1.01
MATR3-221ENST00000513121 MED24O75448 989 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 FGF18O76093 207 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 EOMESO95936 686 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 TECP42680 631 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 ERVFC1P60507 584 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 CATSPER3Q86XQ3 398 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 NOSTRINQ8IVI9 506 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 ASAP3Q8TDY4 903 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 TRAIPQ9BWF2 469 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 INO80BQ9C086 356 aaPredicted RBP21.33■■□□□ 1.01
MATR3-221ENST00000513121 ANKEF1Q9NU02 776 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 DACT1Q9NYF0 836 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 PCDHB12Q9Y5F1 795 aa21.33■■□□□ 1.01
MATR3-221ENST00000513121 NLRC5Q86WI3 1866 aa21.32■■□□□ 1
MATR3-221ENST00000513121 HOXA11P31270 313 aaPredicted RBP21.32■■□□□ 1
MATR3-221ENST00000513121 RARRES1P49788 294 aa21.32■■□□□ 1
MATR3-221ENST00000513121 TOB1P50616 345 aaPredicted RBP21.32■■□□□ 1
MATR3-221ENST00000513121 TTC38Q5R3I4 469 aa21.32■■□□□ 1
MATR3-221ENST00000513121 TWF2Q6IBS0 349 aaKnown RBP21.32■■□□□ 1
MATR3-221ENST00000513121 EXOC8Q8IYI6 725 aa21.32■■□□□ 1
MATR3-221ENST00000513121 RNF149Q8NC42 400 aa21.32■■□□□ 1
MATR3-221ENST00000513121 TMX3Q96JJ7 454 aa21.32■■□□□ 1
MATR3-221ENST00000513121 MTRQ99707 1265 aa21.32■■□□□ 1
MATR3-221ENST00000513121 AAASQ9NRG9 546 aa21.32■■□□□ 1
MATR3-221ENST00000513121 RALGAPA2Q2PPJ7 1873 aa21.32■■□□□ 1
MATR3-221ENST00000513121 GRXCR2A6NFK2 248 aa21.31■■□□□ 1
MATR3-221ENST00000513121 HOXA2O43364 376 aa21.31■■□□□ 1
MATR3-221ENST00000513121 OR52Z1P0C646 297 aa21.31■■□□□ 1
MATR3-221ENST00000513121 U2AF2P26368 475 aaKnown RBP eCLIP21.31■■□□□ 12e-11■■■■□ 25.7
MATR3-221ENST00000513121 ARL2P36404 184 aa21.31■■□□□ 1
MATR3-221ENST00000513121 UBXN11Q5T124 520 aa21.31■■□□□ 1
MATR3-221ENST00000513121 PTCRAQ6ISU1 281 aaPredicted RBP21.31■■□□□ 1
MATR3-221ENST00000513121 KCNT2Q6UVM3 1135 aa21.31■■□□□ 1
MATR3-221ENST00000513121 SRGAP1Q7Z6B7 1085 aa21.31■■□□□ 1
MATR3-221ENST00000513121 RBM23Q86U06 439 aaKnown RBP21.31■■□□□ 1
MATR3-221ENST00000513121 THNSL1Q8IYQ7 743 aa21.31■■□□□ 1
MATR3-221ENST00000513121 TCP11Q8WWU5 503 aa21.31■■□□□ 1
MATR3-221ENST00000513121 AGPAT5Q9NUQ2 364 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms