RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TMX3Q96JJ7 454 aa7.26□□□□□ -1.25
KDM3B-208ENST00000512928 MTRQ99707 1265 aa7.26□□□□□ -1.25
KDM3B-208ENST00000512928 TMEM60Q9H2L4 133 aa7.26□□□□□ -1.25
KDM3B-208ENST00000512928 ALG13Q9NP73 1137 aaKnown RBP7.26□□□□□ -1.25
KDM3B-208ENST00000512928 CD320Q9NPF0 282 aa7.26□□□□□ -1.25
KDM3B-208ENST00000512928 SMC3Q9UQE7 1217 aa7.26□□□□□ -1.25
KDM3B-208ENST00000512928 COL4A3BPQ9Y5P4 624 aa7.26□□□□□ -1.25
KDM3B-208ENST00000512928 LOXHD1Q8IVV2 1947 aa7.26□□□□□ -1.25
KDM3B-208ENST00000512928 COL4A6Q14031 1691 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 C9IYK1 514 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 GRM6O15303 877 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 USO1O60763 962 aaKnown RBP7.25□□□□□ -1.25
KDM3B-208ENST00000512928 BMP1P13497 986 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 POU3F3P20264 500 aaPredicted RBP7.25□□□□□ -1.25
KDM3B-208ENST00000512928 GJB2P29033 226 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 BMPR1AP36894 532 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 MCM2P49736 904 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 LAMTOR4Q0VGL1 99 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 CUL4AQ13619 759 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 AAK1Q2M2I8 961 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 TIGD5Q53EQ6 642 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 ZNF410Q86VK4 478 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 THNSL1Q8IYQ7 743 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 RNF149Q8NC42 400 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 NEK9Q8TD19 979 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 MICAL1Q8TDZ2 1067 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 TCP11Q8WWU5 503 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 PRPF31Q8WWY3 499 aaKnown RBP7.25□□□□□ -1.25
KDM3B-208ENST00000512928 MRPL38Q96DV4 380 aaKnown RBP7.25□□□□□ -1.25
KDM3B-208ENST00000512928 MTMR9Q96QG7 549 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 INO80BQ9C086 356 aaPredicted RBP7.25□□□□□ -1.25
KDM3B-208ENST00000512928 RC3H2Q9HBD1 1191 aaKnown RBP7.25□□□□□ -1.25
KDM3B-208ENST00000512928 C11orf16Q9NQ32 467 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 AAASQ9NRG9 546 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 TMEM161AQ9NX61 479 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 DACT1Q9NYF0 836 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 LMCD1Q9NZU5 365 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 SSUH2Q9Y2M2 353 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.25□□□□□ -1.25
KDM3B-208ENST00000512928 PCDHB12Q9Y5F1 795 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 NLRC5Q86WI3 1866 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 EVPLQ92817 2033 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 WDR81Q562E7 1941 aa7.25□□□□□ -1.25
KDM3B-208ENST00000512928 RALGAPA2Q2PPJ7 1873 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 IGKV6-21A0A0C4DH24 114 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 INO80B-WBP1J3KQ70 363 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 HOXA2O43364 376 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 GAS2O43903 313 aaKnown RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 ERLIN2O94905 339 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 RB1P06400 928 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 KCNA5P22460 613 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 CA8P35219 290 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 PLA2G5P39877 138 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 CCT6AP40227 531 aaKnown RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 PHKA2P46019 1235 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 TRAPPC10P48553 1259 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 NCBP1Q09161 790 aaKnown RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 ORC2Q13416 577 aaPredicted RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 TFDP1Q14186 410 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 DSC3Q14574 896 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 ZRSR1Q15695 479 aaKnown RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 TMEM132AQ24JP5 1023 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 TCEAL5Q5H9L2 206 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 HAUS3Q68CZ6 603 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 POTEGQ6S5H5 508 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 CATSPER3Q86XQ3 398 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 ECHDC2Q86YB7 292 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 LRRC43Q8N309 656 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 KLHL23Q8NBE8 558 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 HELQQ8TDG4 1101 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 CLP1Q92989 425 aaKnown RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 LPPQ93052 612 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 CEP89Q96ST8 783 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 HSD17B14Q9BPX1 270 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 RAB34Q9BZG1 259 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 POLR3FQ9H1D9 316 aaPredicted RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 NSUN3Q9H649 340 aaKnown RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 IGFLR1Q9H665 355 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 DHX33Q9H6R0 707 aaKnown RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 TUFT1Q9NNX1 390 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 TYW1Q9NV66 732 aaKnown RBP7.24□□□□□ -1.25
KDM3B-208ENST00000512928 HCSTQ9UBK5 93 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 LRWD1Q9UFC0 647 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 COG5Q9UP83 839 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 INPP5FQ9Y2H2 1132 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 PPME1Q9Y570 386 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 PCDHB6Q9Y5E3 794 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 ARID2Q68CP9 1835 aa7.24□□□□□ -1.25
KDM3B-208ENST00000512928 MYH15Q9Y2K3 1946 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 VPS37CA5D8V6 355 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-208ENST00000512928 ARHGEF35A5YM69 484 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 LRRIQ4A6NIV6 560 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 C5orf67F2Z3F1 127 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 H3BQ06 376 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-208ENST00000512928 MED24O75448 989 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 DGAT1O75907 488 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 ITGB1P05556 798 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 LAG3P18627 525 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 LIG1P18858 919 aa7.23□□□□□ -1.25
KDM3B-208ENST00000512928 U2AF2P26368 475 aaKnown RBP eCLIP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms