RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 ADAM32Q8TC27 787 aa10.46□□□□□ -0.73
MSH3-203ENST00000512531 BADQ92934 168 aa10.46□□□□□ -0.73
MSH3-203ENST00000512531 PLIN2Q99541 437 aa10.46□□□□□ -0.73
MSH3-203ENST00000512531 NOC4LQ9BVI4 516 aaKnown RBP10.46□□□□□ -0.73
MSH3-203ENST00000512531 VPS16Q9H269 839 aa10.46□□□□□ -0.73
MSH3-203ENST00000512531 TCEAL9Q9UHQ7 104 aa10.46□□□□□ -0.73
MSH3-203ENST00000512531 DNAI1Q9UI46 699 aa10.46□□□□□ -0.73
MSH3-203ENST00000512531 GPSM3Q9Y4H4 160 aa10.46□□□□□ -0.73
MSH3-203ENST00000512531 TTC28Q96AY4 2481 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 TRIM43BA6NCK2 446 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 PP2D1A8MPX8 630 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 KLRC4O43908 158 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 CYP3A4P08684 503 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 SREBF1P36956 1147 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 ADKP55263 362 aaKnown RBP10.45□□□□□ -0.74
MSH3-203ENST00000512531 TLE2Q04725 743 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 PPP2R3AQ06190 1150 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 RBL2Q08999 1139 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 TBC1D8BQ0IIM8 1120 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 TMEM132BQ14DG7 1078 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 UBE2SQ16763 222 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 ZNF792Q3KQV3 632 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 FIGNQ5HY92 759 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 C9orf50Q5SZB4 431 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 SYT10Q6XYQ8 523 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 ANKRD33Q7Z3H0 272 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 NCAPG2Q86XI2 1143 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 MAFAQ8NHW3 353 aaPredicted RBP10.45□□□□□ -0.74
MSH3-203ENST00000512531 TRIM43Q96BQ3 446 aaPredicted RBP10.45□□□□□ -0.74
MSH3-203ENST00000512531 ATG4CQ96DT6 458 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 CNOT6LQ96LI5 555 aaKnown RBP10.45□□□□□ -0.74
MSH3-203ENST00000512531 CEP63Q96MT8 703 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 MBOAT7Q96N66 472 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 TINF2Q9BSI4 451 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 TUBGCP2Q9BSJ2 902 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 PRR14Q9BWN1 585 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 TSGA10Q9BZW7 698 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 XPNPEP3Q9NQH7 507 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 TAB2Q9NYJ8 693 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 MAP3K20Q9NYL2 800 aaKnown RBP10.45□□□□□ -0.74
MSH3-203ENST00000512531 GDAQ9Y2T3 454 aa10.45□□□□□ -0.74
MSH3-203ENST00000512531 ZNFX1Q9P2E3 1918 aaKnown RBP10.45□□□□□ -0.74
MSH3-203ENST00000512531 A0A1W2PQJ5 194 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 SOWAHDA6NJG2 315 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 SLC37A4O43826 429 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 SSBP05455 408 aaKnown RBP eCLIP10.44□□□□□ -0.74
MSH3-203ENST00000512531 CLTBP09497 229 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 AKR1A1P14550 325 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 GAP43P17677 238 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 RPL13P26373 211 aaKnown RBP10.44□□□□□ -0.74
MSH3-203ENST00000512531 CASP1P29466 404 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 CASP14P31944 242 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 CIITAP33076 1130 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 KRT9P35527 623 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 PBX1P40424 430 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 GNG11P61952 73 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 FKBP3Q00688 224 aaKnown RBP10.44□□□□□ -0.74
MSH3-203ENST00000512531 PTK2Q05397 1052 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 GRB10Q13322 594 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 PLS1Q14651 629 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 KCTD2Q14681 263 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 SPA17Q15506 151 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 MAN2A1Q16706 1144 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 KIAA1755Q5JYT7 1200 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 TTI2Q6NXR4 508 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 FMNL3Q8IVF7 1028 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 CCDC170Q8IYT3 715 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 NEK9Q8TD19 979 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 CPLX3Q8WVH0 158 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 UBXN4Q92575 508 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 MMP19Q99542 508 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 MTRQ99707 1265 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 WDR11Q9BZH6 1224 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 EDEM3Q9BZQ6 932 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 TTYH1Q9H313 450 aaPredicted RBP10.44□□□□□ -0.74
MSH3-203ENST00000512531 KCNMB3Q9NPA1 279 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 PRDM5Q9NQX1 630 aaPredicted RBP10.44□□□□□ -0.74
MSH3-203ENST00000512531 ABHD10Q9NUJ1 306 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 PANK4Q9NVE7 773 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 INTS13Q9NVM9 706 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 FAM184BQ9ULE4 1060 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 PPP1R9AQ9ULJ8 1098 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 SMCHD1A6NHR9 2005 aa10.44□□□□□ -0.74
MSH3-203ENST00000512531 SYNGAP1Q96PV0 1343 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 PARP14Q460N5 1801 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.43□□□□□ -0.74
MSH3-203ENST00000512531 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.43□□□□□ -0.74
MSH3-203ENST00000512531 POTEMA6NI47 508 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 USP27XA6NNY8 438 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 VWA5AO00534 786 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 ATP2A1O14983 1001 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 TEX33O43247 280 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 CALUO43852 315 aaPredicted RBP10.43□□□□□ -0.74
MSH3-203ENST00000512531 USO1O60763 962 aaKnown RBP10.43□□□□□ -0.74
MSH3-203ENST00000512531 TBCAO75347 108 aaKnown RBP10.43□□□□□ -0.74
MSH3-203ENST00000512531 URI1O94763 535 aaPredicted RBP10.43□□□□□ -0.74
MSH3-203ENST00000512531 TUBBP07437 444 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 PLA2G4BP0C869 781 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 ZNF865P0CJ78 1059 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms