RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 TYW1BQ6NUM6 668 aa13.84□□□□□ -0.19
DDR1-267ENST00000512336 EFCAB12Q6NXP0 572 aa13.84□□□□□ -0.19
DDR1-267ENST00000512336 ZC3H14Q6PJT7 736 aaKnown RBP13.84□□□□□ -0.19
DDR1-267ENST00000512336 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
DDR1-267ENST00000512336 PPFIBP1Q86W92 1011 aa13.84□□□□□ -0.19
DDR1-267ENST00000512336 LINC01465Q8N7H1 131 aa13.84□□□□□ -0.19
DDR1-267ENST00000512336 MAP7D2Q96T17 732 aa13.84□□□□□ -0.19
DDR1-267ENST00000512336 VN1R3Q9BXE9 311 aa13.84□□□□□ -0.19
DDR1-267ENST00000512336 ACACBO00763 2458 aa13.84□□□□□ -0.19
DDR1-267ENST00000512336 TPRP12270 2363 aaKnown RBP13.83□□□□□ -0.19
DDR1-267ENST00000512336 CCDC69A6NI79 296 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 SH2B2O14492 632 aaPredicted RBP13.83□□□□□ -0.2
DDR1-267ENST00000512336 PRC1O43663 620 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 GALTP07902 379 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 SP9P0CG40 484 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 KLRC2P26717 231 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 ZNF76P36508 570 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 CLCN4P51793 760 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 NAPAP54920 295 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 TBC1D8BQ0IIM8 1120 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 LONRF3Q496Y0 759 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 TMTC3Q6ZXV5 915 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 LPPQ93052 612 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 KLHL5Q96PQ7 755 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 NRDE2Q9H7Z3 1164 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 RIC8AQ9NPQ8 531 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.2
DDR1-267ENST00000512336 MAFBQ9Y5Q3 323 aaPredicted RBP13.83□□□□□ -0.2
DDR1-267ENST00000512336 FAM86B1E9PN63 330 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 MAGEB2O15479 319 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 CSDE1O75534 798 aaKnown RBP13.82□□□□□ -0.2
DDR1-267ENST00000512336 FOSP01100 380 aaPredicted RBP13.82□□□□□ -0.2
DDR1-267ENST00000512336 SSBP05455 408 aaKnown RBP eCLIP13.82□□□□□ -0.2
DDR1-267ENST00000512336 CNPP09543 421 aaKnown RBP13.82□□□□□ -0.2
DDR1-267ENST00000512336 FAM86B2P0C5J1 330 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 DARSP14868 501 aaKnown RBP13.82□□□□□ -0.2
DDR1-267ENST00000512336 TMOD1P28289 359 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 GBP2P32456 591 aaPredicted RBP13.82□□□□□ -0.2
DDR1-267ENST00000512336 SREBF1P36956 1147 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 GPC3P51654 580 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 C15orf39Q6ZRI6 1047 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 NIPA1Q7RTP0 329 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 PLA2G4DQ86XP0 818 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 SLC44A3Q8N4M1 653 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 SCLT1Q96NL6 688 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 EMILIN2Q9BXX0 1053 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 GBP3Q9H0R5 595 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 RWDD1Q9H446 243 aaPredicted RBP13.82□□□□□ -0.2
DDR1-267ENST00000512336 TBC1D13Q9NVG8 400 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 DACT1Q9NYF0 836 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 DLGAP2Q9P1A6 1054 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 GABBR1Q9UBS5 961 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 DNAJB4Q9UDY4 337 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 CFAP47Q6ZTR5 3102 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 C2orf16Q68DN1 1984 aa13.82□□□□□ -0.2
DDR1-267ENST00000512336 GPR179Q6PRD1 2367 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 MEIS3P2A8K0S8 358 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 IPO5O00410 1097 aaKnown RBP13.81□□□□□ -0.2
DDR1-267ENST00000512336 B4GALT3O60512 393 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 IGHDP01880 384 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 CALM1P0DP23 149 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 CALM2P0DP24 149 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 CALM3P0DP25 149 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 SRFP11831 508 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 GSPT1P15170 499 aaKnown RBP13.81□□□□□ -0.2
DDR1-267ENST00000512336 PHKA2P46019 1235 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 SLC11A1P49279 550 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 ADCY7P51828 1080 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 COL9A3Q14050 684 aaPredicted RBP13.81□□□□□ -0.2
DDR1-267ENST00000512336 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
DDR1-267ENST00000512336 C1orf210Q8IVY1 113 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 SUMF1Q8NBK3 374 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 GPR152Q8TDT2 470 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 RUFY2Q8WXA3 655 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 MYADMQ96S97 322 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 INPP5FQ9Y2H2 1132 aa13.81□□□□□ -0.2
DDR1-267ENST00000512336 IGLV3-22A0A075B6J6 115 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 CARNS1A5YM72 827 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 POTEMA6NI47 508 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 PSAPP07602 524 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 RNASELQ05823 741 aaKnown RBP13.8□□□□□ -0.2
DDR1-267ENST00000512336 AP3B2Q13367 1082 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 NOMO2Q5JPE7 1267 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 PHLDB3Q6NSJ2 640 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 ZNF746Q6NUN9 644 aaPredicted RBP13.8□□□□□ -0.2
DDR1-267ENST00000512336 POTEGQ6S5H5 508 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 GLB1LQ6UWU2 654 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 ZNF710Q8N1W2 664 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 TMTC2Q8N394 836 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 FANCBQ8NB91 859 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 CMASQ8NFW8 434 aaPredicted RBP13.8□□□□□ -0.2
DDR1-267ENST00000512336 NLRP7Q8WX94 980 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 ZNF577Q9BSK1 485 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 MTA3Q9BTC8 594 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 WDR6Q9NNW5 1121 aaKnown RBP13.8□□□□□ -0.2
DDR1-267ENST00000512336 MAN1C1Q9NR34 630 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 ARHGEF3Q9NR81 526 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 EPS15L1Q9UBC2 864 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 SIT1Q9Y3P8 196 aa13.8□□□□□ -0.2
DDR1-267ENST00000512336 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms