RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 USO1O60763 962 aaKnown RBP18.38■□□□□ 0.53
DDX41-213ENST00000512027 SFPQP23246 707 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDX41-213ENST00000512027 FAM189BP81408 668 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 LONRF3Q496Y0 759 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 CATSPER4Q7RTX7 472 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 ECHDC2Q86YB7 292 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 ZNF710Q8N1W2 664 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 ASAP3Q8TDY4 903 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 CCDC43Q96MW1 224 aaKnown RBP18.38■□□□□ 0.53
DDX41-213ENST00000512027 COL25A1Q9BXS0 654 aaPredicted RBP18.38■□□□□ 0.53
DDX41-213ENST00000512027 ATP6V0A4Q9HBG4 840 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 ALG13Q9NP73 1137 aaKnown RBP18.38■□□□□ 0.53
DDX41-213ENST00000512027 ANKEF1Q9NU02 776 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 TMEM161AQ9NX61 479 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 PIN4Q9Y237 131 aaKnown RBP18.38■□□□□ 0.53
DDX41-213ENST00000512027 PPME1Q9Y570 386 aa18.38■□□□□ 0.53
DDX41-213ENST00000512027 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.38■□□□□ 0.53
DDX41-213ENST00000512027 TCF20Q9UGU0 1960 aaKnown RBP18.37■□□□□ 0.53
DDX41-213ENST00000512027 PP2D1A8MPX8 630 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 C5orf67F2Z3F1 127 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 DLL1O00548 723 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 ATF7P17544 494 aaPredicted RBP18.37■□□□□ 0.53
DDX41-213ENST00000512027 IL17AQ16552 155 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 ECM1Q16610 540 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 MAEAQ7L5Y9 396 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 FERMT3Q86UX7 667 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 RNF149Q8NC42 400 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 IL27Q8NEV9 243 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 MRPL38Q96DV4 380 aaKnown RBP18.37■□□□□ 0.53
DDX41-213ENST00000512027 POLR3CQ9BUI4 534 aaPredicted RBP18.37■□□□□ 0.53
DDX41-213ENST00000512027 TUFT1Q9NNX1 390 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 GPRC5CQ9NQ84 441 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.37■□□□□ 0.53
DDX41-213ENST00000512027 LMCD1Q9NZU5 365 aa18.37■□□□□ 0.53
DDX41-213ENST00000512027 FXR2P51116 673 aaKnown RBP eCLIP18.36■□□□□ 0.53
DDX41-213ENST00000512027 CDC42EP1Q00587 391 aa18.36■□□□□ 0.53
DDX41-213ENST00000512027 CUL4AQ13619 759 aa18.36■□□□□ 0.53
DDX41-213ENST00000512027 CAPSQ13938 189 aa18.36■□□□□ 0.53
DDX41-213ENST00000512027 SPOUT1Q5T280 376 aaKnown RBP18.36■□□□□ 0.53
DDX41-213ENST00000512027 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
DDX41-213ENST00000512027 EXOC8Q8IYI6 725 aa18.36■□□□□ 0.53
DDX41-213ENST00000512027 TCP11Q8WWU5 503 aa18.36■□□□□ 0.53
DDX41-213ENST00000512027 LPPQ93052 612 aa18.36■□□□□ 0.53
DDX41-213ENST00000512027 C11orf84Q9BUA3 381 aaPredicted RBP18.36■□□□□ 0.53
DDX41-213ENST00000512027 ELAC1Q9H777 363 aaKnown RBP18.36■□□□□ 0.53
DDX41-213ENST00000512027 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
DDX41-213ENST00000512027 LRWD1Q9UFC0 647 aa18.36■□□□□ 0.53
DDX41-213ENST00000512027 RWDD3Q9Y3V2 267 aa18.36■□□□□ 0.53
DDX41-213ENST00000512027 MEIS3P2A8K0S8 358 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 GAS2O43903 313 aaKnown RBP18.35■□□□□ 0.53
DDX41-213ENST00000512027 DGAT1O75907 488 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 ITGB1P05556 798 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 RB1P06400 928 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 DNAJB1P25685 340 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 RPA1P27694 616 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 CDC25AP30304 524 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 CCT6AP40227 531 aaKnown RBP18.35■□□□□ 0.53
DDX41-213ENST00000512027 CLLU1OSQ5K130 101 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 TWF2Q6IBS0 349 aaKnown RBP18.35■□□□□ 0.53
DDX41-213ENST00000512027 LRRC55Q6ZSA7 311 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 ZNF598Q86UK7 904 aaKnown RBP18.35■□□□□ 0.53
DDX41-213ENST00000512027 KLHL23Q8NBE8 558 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 HELQQ8TDG4 1101 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 CASD1Q96PB1 797 aa18.35■□□□□ 0.53
DDX41-213ENST00000512027 INO80BQ9C086 356 aaPredicted RBP18.35■□□□□ 0.53
DDX41-213ENST00000512027 POLR3FQ9H1D9 316 aaPredicted RBP18.35■□□□□ 0.53
DDX41-213ENST00000512027 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
DDX41-213ENST00000512027 A0A0U1RQF3 1178 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 GLRA2P23416 452 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 ARL2P36404 184 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 PBX3P40426 434 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 PHKA2P46019 1235 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 KCNQ1P51787 676 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 CAMK1Q14012 370 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 PTPROQ16827 1216 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 TCEAL5Q5H9L2 206 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 SNX29Q8TEQ0 813 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 TMEM117Q9H0C3 514 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 CWH43Q9H720 699 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 POLD4Q9HCU8 107 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 AGPAT5Q9NUQ2 364 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 PLAGL2Q9UPG8 496 aa18.34■□□□□ 0.53
DDX41-213ENST00000512027 TTC28Q96AY4 2481 aa18.33■□□□□ 0.53
DDX41-213ENST00000512027 VPS37CA5D8V6 355 aaPredicted RBP18.33■□□□□ 0.52
DDX41-213ENST00000512027 ASAP2O43150 1006 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 RILPL1Q5EBL4 403 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 TJAP1Q5JTD0 557 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 HAUS3Q68CZ6 603 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 SRGAP1Q7Z6B7 1085 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 IGSF22Q8N9C0 903 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 ATXN2LQ8WWM7 1075 aaKnown RBP18.33■□□□□ 0.52
DDX41-213ENST00000512027 ASB2Q96Q27 587 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 NACC1Q96RE7 527 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 CHST12Q9NRB3 414 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 DACT1Q9NYF0 836 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 DBR1Q9UK59 544 aaKnown RBP18.33■□□□□ 0.52
DDX41-213ENST00000512027 PCDHGC5Q9Y5F6 944 aa18.33■□□□□ 0.52
DDX41-213ENST00000512027 XRCC6P12956 609 aaKnown RBP eCLIP18.32■□□□□ 0.52
DDX41-213ENST00000512027 HOXA11P31270 313 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms