RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 UBP1Q9NZI7 540 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 SPATA7Q9P0W8 599 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 COL4A1P02462 1669 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 NRXN2Q9P2S2 1712 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 KRBA1A5PL33 1030 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCDC69A6NI79 296 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 TISP43B9A030 160 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 B9A039 149 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 SNAP23O00161 211 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 TBCAO75347 108 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 EEF2P13639 858 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 MSNP26038 577 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 RDXP35241 583 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 ATXN1P54253 815 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 USP14P54578 494 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 FOXO4P98177 505 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 GABPB1Q06547 395 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 CDC16Q13042 620 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 PRKG1Q13976 671 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 OXLD1Q5BKU9 147 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 AKNAD1Q5T1N1 836 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 PCNX4Q63HM2 1172 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 STYK1Q6J9G0 422 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLC30A6Q6NXT4 461 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 ESX1Q8N693 406 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 ADAMTS18Q8TE60 1221 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 CEP295NLQ96MC4 621 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 NT5C1BQ96P26 610 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 CSRNP1Q96S65 589 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRIM7Q9C029 511 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 BRMS1Q9HCU9 246 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZNF277Q9NRM2 450 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 DDX18Q9NVP1 670 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 MCM9Q9NXL9 1143 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 ANKIB1Q9P2G1 1089 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 HECAQ9UBI9 543 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 HPCAL4Q9UM19 191 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 RNF123Q5XPI4 1314 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 C6orf229H3BNL8 230 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 EIF3FO00303 357 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 RIMBP2O15034 1052 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 NMT2O60551 498 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 TAF5LO75529 589 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 FBXO21O94952 628 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 GNRH1P01148 92 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 MYBL2P10244 700 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 ACTN2P35609 894 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 EIF4A3P38919 411 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 POLD2P49005 469 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 RPS8P62241 208 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 LAPTM5Q13571 262 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 GRAPQ13588 217 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 SCARB2Q14108 478 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 TERF2Q15554 542 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 INTS3Q68E01 1043 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 TLDC1Q6P9B6 456 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 SASS6Q6UVJ0 657 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 LPCAT2Q7L5N7 544 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 NUP54Q7Z3B4 507 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 KRT222Q8N1A0 295 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 PHTF2Q8N3S3 785 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 GRAPLQ8TC17 118 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRIM56Q9BRZ2 755 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 EDEM3Q9BZQ6 932 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 WDR12Q9GZL7 423 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 EHMT1Q9H9B1 1298 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 CNNM1Q9NRU3 951 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 ETAA1Q9NY74 926 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCDC39Q9UFE4 941 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 GJD2Q9UKL4 321 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 JRKLQ9Y4A0 524 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 PCDHGB6Q9Y5F9 930 aa5.51□□□□□ -1.53
TRAPPC11-208ENST00000511955 CDHR2Q9BYE9 1310 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 PCNTO95613 3336 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 IBTKQ9P2D0 1353 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLX4Q8IY92 1834 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 A6NNZ2 444 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 LACTBL1A8MY62 500 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 B4E171 279 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 NFKBIEO00221 500 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 EIF1AYO14602 144 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SGSM2O43147 1006 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SRGAP3O43295 1099 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 GRIN3BO60391 1043 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 CTNND1O60716 968 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 USP2O75604 605 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 DDAH1O94760 285 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLITRK5O94991 958 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SNUPNO95149 360 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 GOSR1O95249 250 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 MT-CO1P00395 513 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 POLBP06746 335 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 USP17L7P0C7H9 530 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 PCP11498 1178 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 HSPA6P17066 643 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 COL9A1P20849 921 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 LPOP22079 712 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 IGHMBP2P38935 993 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 IARSP41252 1262 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms