RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ATP6V0A4Q9HBG4 840 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 TMEM161AQ9NX61 479 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 LMCD1Q9NZU5 365 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 SMC3Q9UQE7 1217 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 PIN4Q9Y237 131 aaKnown RBP14.82□□□□□ -0.04
RNF4-215ENST00000511843 H3BQV1 296 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 USO1O60763 962 aaKnown RBP14.81□□□□□ -0.04
RNF4-215ENST00000511843 ATF7P17544 494 aaPredicted RBP14.81□□□□□ -0.04
RNF4-215ENST00000511843 SFPQP23246 707 aaKnown RBP eCLIP14.81□□□□□ -0.04
RNF4-215ENST00000511843 DNAJB1P25685 340 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 TRAPPC10P48553 1259 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 MCM2P49736 904 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 RARRES1P49788 294 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 KCNQ1P51787 676 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 PTGDRQ13258 359 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 ECM1Q16610 540 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 CLLU1OSQ5K130 101 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 SPOUT1Q5T280 376 aaKnown RBP14.81□□□□□ -0.04
RNF4-215ENST00000511843 MAEAQ7L5Y9 396 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 CATSPER4Q7RTX7 472 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 FERMT3Q86UX7 667 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 ZNF710Q8N1W2 664 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 RNF149Q8NC42 400 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 ASAP3Q8TDY4 903 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 ASB2Q96Q27 587 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 C11orf84Q9BUA3 381 aaPredicted RBP14.81□□□□□ -0.04
RNF4-215ENST00000511843 ANKEF1Q9NU02 776 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 KIF3AQ9Y496 699 aa14.81□□□□□ -0.04
RNF4-215ENST00000511843 MYH11P35749 1972 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 PP2D1A8MPX8 630 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 ITGB1P05556 798 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 PBX3P40426 434 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 MRPS5P82675 430 aaKnown RBP14.8□□□□□ -0.04
RNF4-215ENST00000511843 CDC42EP1Q00587 391 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 ORC2Q13416 577 aaPredicted RBP14.8□□□□□ -0.04
RNF4-215ENST00000511843 IL17AQ16552 155 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 PTPROQ16827 1216 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 TCEAL5Q5H9L2 206 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 TJAP1Q5JTD0 557 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 LRRC55Q6ZSA7 311 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 KLHL23Q8NBE8 558 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 HELQQ8TDG4 1101 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 ATXN2LQ8WWM7 1075 aaKnown RBP14.8□□□□□ -0.04
RNF4-215ENST00000511843 LPPQ93052 612 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 CASD1Q96PB1 797 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 ELAC1Q9H777 363 aaKnown RBP14.8□□□□□ -0.04
RNF4-215ENST00000511843 TUFT1Q9NNX1 390 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 GPRC5CQ9NQ84 441 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 TYW1Q9NV66 732 aaKnown RBP14.8□□□□□ -0.04
RNF4-215ENST00000511843 RWDD3Q9Y3V2 267 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 PPME1Q9Y570 386 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 PCDHGC5Q9Y5F6 944 aa14.8□□□□□ -0.04
RNF4-215ENST00000511843 TDRD15B5MCY1 1934 aaKnown RBP14.8□□□□□ -0.04
RNF4-215ENST00000511843 A0A0U1RQF3 1178 aa14.79□□□□□ -0.04
RNF4-215ENST00000511843 MEIS3P2A8K0S8 358 aa14.79□□□□□ -0.04
RNF4-215ENST00000511843 RB1P06400 928 aa14.79□□□□□ -0.04
RNF4-215ENST00000511843 CCT6AP40227 531 aaKnown RBP14.79□□□□□ -0.04
RNF4-215ENST00000511843 CAPSQ13938 189 aa14.79□□□□□ -0.04
RNF4-215ENST00000511843 CAMK1Q14012 370 aa14.79□□□□□ -0.04
RNF4-215ENST00000511843 TWF2Q6IBS0 349 aaKnown RBP14.79□□□□□ -0.04
RNF4-215ENST00000511843 ZNF598Q86UK7 904 aaKnown RBP14.79□□□□□ -0.04
RNF4-215ENST00000511843 ERMNQ8TAM6 284 aa14.79□□□□□ -0.04
RNF4-215ENST00000511843 TCP11Q8WWU5 503 aa14.79□□□□□ -0.04
RNF4-215ENST00000511843 POLR3CQ9BUI4 534 aaPredicted RBP14.79□□□□□ -0.04
RNF4-215ENST00000511843 INO80BQ9C086 356 aaPredicted RBP14.79□□□□□ -0.04
RNF4-215ENST00000511843 POLR3FQ9H1D9 316 aaPredicted RBP14.79□□□□□ -0.04
RNF4-215ENST00000511843 CWH43Q9H720 699 aa14.79□□□□□ -0.04
RNF4-215ENST00000511843 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.79□□□□□ -0.04
RNF4-215ENST00000511843 PLAGL2Q9UPG8 496 aa14.79□□□□□ -0.04
RNF4-215ENST00000511843 MYH15Q9Y2K3 1946 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 GAS2O43903 313 aaKnown RBP14.78□□□□□ -0.04
RNF4-215ENST00000511843 DGAT1O75907 488 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 RPA1P27694 616 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 CDC25AP30304 524 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 GTF2F1P35269 517 aaKnown RBP eCLIP14.78□□□□□ -0.049e-9■■■■■ 35.7
RNF4-215ENST00000511843 IRS1P35568 1242 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 PHKA2P46019 1235 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
RNF4-215ENST00000511843 TIGD5Q53EQ6 642 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 LARP1BQ659C4 914 aaKnown RBP14.78□□□□□ -0.04
RNF4-215ENST00000511843 EP400NLQ6ZTU2 488 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 SRGAP1Q7Z6B7 1085 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 EXOC8Q8IYI6 725 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 ABI1Q8IZP0 508 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 COLGALT1Q8NBJ5 622 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 SPPL3Q8TCT6 385 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 HLA-CQ95604 372 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 NECAB3Q96P71 396 aaPredicted RBP14.78□□□□□ -0.04
RNF4-215ENST00000511843 PLVAPQ9BX97 442 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 TMEM117Q9H0C3 514 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 POLD4Q9HCU8 107 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 FOXD4L1Q9NU39 408 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 AGPAT5Q9NUQ2 364 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 DACT1Q9NYF0 836 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 LRWD1Q9UFC0 647 aa14.78□□□□□ -0.04
RNF4-215ENST00000511843 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.78□□□□□ -0.04
RNF4-215ENST00000511843 INO80B-WBP1J3KQ70 363 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 GLRA2P23416 452 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 HOXA11P31270 313 aaPredicted RBP14.77□□□□□ -0.05
RNF4-215ENST00000511843 ARL2P36404 184 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms