RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 TMEM161AQ9NX61 479 aa17.98■□□□□ 0.47
PDLIM5-216ENST00000511767 PRUNE2Q8WUY3 3088 aa17.98■□□□□ 0.47
PDLIM5-216ENST00000511767 A0A0U1RQF3 1178 aa17.97■□□□□ 0.47
PDLIM5-216ENST00000511767 GTPBP6O43824 516 aaPredicted RBP17.97■□□□□ 0.47
PDLIM5-216ENST00000511767 RB1P06400 928 aa17.97■□□□□ 0.47
PDLIM5-216ENST00000511767 POU5F1BQ06416 359 aa17.97■□□□□ 0.47
PDLIM5-216ENST00000511767 DTHD1Q6ZMT9 781 aa17.97■□□□□ 0.47
PDLIM5-216ENST00000511767 SRGAP1Q7Z6B7 1085 aa17.97■□□□□ 0.47
PDLIM5-216ENST00000511767 NLRP4Q96MN2 994 aa17.97■□□□□ 0.47
PDLIM5-216ENST00000511767 ATP6V0A4Q9HBG4 840 aa17.97■□□□□ 0.47
PDLIM5-216ENST00000511767 MYO7AQ13402 2215 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 C5orf67F2Z3F1 127 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 EOMESO95936 686 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 SYT1P21579 422 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 HOXA11P31270 313 aaPredicted RBP17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 CCT6AP40227 531 aaKnown RBP17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 PTENP60484 403 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 ATP2C1P98194 919 aaPredicted RBP17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 GPM6BQ13491 265 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 MXD4Q14582 209 aaPredicted RBP17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 ZNF598Q86UK7 904 aaKnown RBP17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 ECHDC2Q86YB7 292 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 RNF149Q8NC42 400 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 GDPD5Q8WTR4 605 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 TRAIPQ9BWF2 469 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 PRDM6Q9NQX0 595 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 RNF19AQ9NV58 838 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 STK24Q9Y6E0 443 aa17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 MRPL42Q9Y6G3 142 aaKnown RBP17.96■□□□□ 0.47
PDLIM5-216ENST00000511767 ADGRA3Q8IWK6 1321 aa17.96■□□□□ 0.46
PDLIM5-216ENST00000511767 K7ELQ4 463 aaPredicted RBP17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 ZNF623O75123 536 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 CYP11B2P19099 503 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 PDCP20941 246 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 GLRA2P23416 452 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 CDC25AP30304 524 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 POTEGQ6S5H5 508 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 CATSPER4Q7RTX7 472 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 IFNLR1Q8IU57 520 aaPredicted RBP17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 ASAP3Q8TDY4 903 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 MMTAG2Q9BU76 263 aaKnown RBP17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 DACT1Q9NYF0 836 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 KIAA1024Q9UPX6 916 aa17.95■□□□□ 0.46
PDLIM5-216ENST00000511767 EYSQ5T1H1 3165 aa17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 PP2D1A8MPX8 630 aa17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 SFPQP23246 707 aaKnown RBP eCLIP17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 PAN2Q504Q3 1202 aaKnown RBP17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 ARL6IP4Q66PJ3 421 aaKnown RBP17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 PADI6Q6TGC4 694 aa17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 BRAPQ7Z569 592 aa17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 CASD1Q96PB1 797 aa17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 PLVAPQ9BX97 442 aa17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 RAB34Q9BZG1 259 aa17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 TYW1Q9NV66 732 aaKnown RBP17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 RWDD3Q9Y3V2 267 aa17.94■□□□□ 0.46
PDLIM5-216ENST00000511767 TBKBP1A7MCY6 615 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 FGFR1P11362 822 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 ATF7P17544 494 aaPredicted RBP17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 PHKA2P46019 1235 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 KRT79Q5XKE5 535 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 HAUS3Q68CZ6 603 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 LRRC55Q6ZSA7 311 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 MAEAQ7L5Y9 396 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 MICALL1Q8N3F8 863 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 TMEM117Q9H0C3 514 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 GPRC5CQ9NQ84 441 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 PLAGL2Q9UPG8 496 aa17.93■□□□□ 0.46
PDLIM5-216ENST00000511767 GRM6O15303 877 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 USO1O60763 962 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 CTNNB1P35222 781 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 CAPSQ13938 189 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 TFDP1Q14186 410 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 NAALADL2Q58DX5 795 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 MRPL10Q7Z7H8 261 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 MCPH1Q8NEM0 835 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 SPPL3Q8TCT6 385 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 SNX29Q8TEQ0 813 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 P2RX5Q93086 422 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 MRPL38Q96DV4 380 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 CCDC43Q96MW1 224 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 NFKBIZQ9BYH8 718 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 POLR3FQ9H1D9 316 aaPredicted RBP17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 BHMT2Q9H2M3 363 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 CWH43Q9H720 699 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 POLD4Q9HCU8 107 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 FOXD4L1Q9NU39 408 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 AGPAT5Q9NUQ2 364 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 DDX19AQ9NUU7 478 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 DNM3Q9UQ16 869 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 COL4A6Q14031 1691 aa17.92■□□□□ 0.46
PDLIM5-216ENST00000511767 VPS37CA5D8V6 355 aaPredicted RBP17.91■□□□□ 0.46
PDLIM5-216ENST00000511767 ARHGEF35A5YM69 484 aa17.91■□□□□ 0.46
PDLIM5-216ENST00000511767 E9PMD0 336 aa17.91■□□□□ 0.46
PDLIM5-216ENST00000511767 HOXA2O43364 376 aa17.91■□□□□ 0.46
PDLIM5-216ENST00000511767 CAMK1Q14012 370 aa17.91■□□□□ 0.46
PDLIM5-216ENST00000511767 PCBP1Q15365 356 aaKnown RBP eCLIP17.91■□□□□ 0.46
PDLIM5-216ENST00000511767 CLLU1OSQ5K130 101 aa17.91■□□□□ 0.46
PDLIM5-216ENST00000511767 UBXN11Q5T124 520 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms