RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 ADAMTS4O75173 837 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 LYPLA2O95372 231 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 PLS3P13797 630 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 CASP4P49662 377 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 MYL5Q02045 173 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 CAPSQ13938 189 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 MARCH8Q5T0T0 291 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 GDF6Q6KF10 455 aaPredicted RBP8.87□□□□□ -0.99
SMAD1-209ENST00000511125 MTHFD1LQ6UB35 978 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 RNF180Q86T96 592 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 AFAP1L1Q8TED9 768 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 DIS3LQ8TF46 1054 aaKnown RBP8.87□□□□□ -0.99
SMAD1-209ENST00000511125 P2RX5Q93086 422 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 WNT8BQ93098 351 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 CPB2Q96IY4 423 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 DRC1Q96MC2 740 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 MAF1Q9H063 256 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 DHX33Q9H6R0 707 aaKnown RBP8.87□□□□□ -0.99
SMAD1-209ENST00000511125 IFNKQ9P0W0 207 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 PCDHA2Q9Y5H9 948 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 LAMA3Q16787 3333 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 ANKRD63C9JTQ0 380 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 EDN1P05305 212 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 GUCY2CP25092 1073 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 ACLYP53396 1101 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 SMTNP53814 917 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 GJA9P57773 515 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 NCAPHQ15003 741 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 TARBP2Q15633 366 aaKnown RBP8.87□□□□□ -0.99
SMAD1-209ENST00000511125 TCERG1LQ5VWI1 586 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 TMEM130Q8N3G9 435 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 CCDC155Q8N6L0 562 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 PXYLP1Q8TE99 480 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 PSPC1Q8WXF1 523 aaKnown RBP8.87□□□□□ -0.99
SMAD1-209ENST00000511125 KAT6AQ92794 2004 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 FAM167AQ96KS9 214 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 TARS2Q9BW92 718 aaKnown RBP8.87□□□□□ -0.99
SMAD1-209ENST00000511125 NIFKQ9BYG3 293 aaKnown RBP8.87□□□□□ -0.99
SMAD1-209ENST00000511125 EMSYQ7Z589 1322 aa8.87□□□□□ -0.99
SMAD1-209ENST00000511125 RANBP2P49792 3224 aaKnown RBP8.87□□□□□ -0.99
SMAD1-209ENST00000511125 LOC102724159A0A0B4J2E5 919 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 K7ERI5 159 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 PQBP1O60828 265 aaKnown RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 MAFO75444 373 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 C22orf31O95567 290 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 PRKCSHP14314 528 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 DNM2P50570 870 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 GOLGA8FQ08AF8 430 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 GOLGA8DPQ0D2H9 430 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 NFX1Q12986 1120 aaKnown RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 KCNB1Q14721 858 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 PWP2Q15269 919 aaKnown RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 CBWD1Q9BRT8 395 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 MTG1Q9BT17 334 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 C17orf102A2RUQ5 167 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 HNRNPDLO14979 420 aaKnown RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 ADCY5O95622 1261 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 F2P00734 622 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 NR2F2P24468 414 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 SPAG1Q07617 926 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 ADAM9Q13443 819 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 LMBRD2Q68DH5 695 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 CTU1Q7Z7A3 348 aaKnown RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 MCPH1Q8NEM0 835 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 GLT1D1Q96MS3 346 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 NAP1L5Q96NT1 182 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 FIZ1Q96SL8 496 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 CEP89Q96ST8 783 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 DUSP9Q99956 384 aaKnown RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 STARD7Q9NQZ5 370 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 GRIN2DO15399 1336 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 FSD2A1L4K1 749 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 IQCF3P0C7M6 154 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 CTCFP49711 727 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 ITGA7Q13683 1181 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 MAP3K21Q5TCX8 1036 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 KIAA0319LQ8IZA0 1049 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 TRIML1Q8N9V2 468 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 RETREG2Q8NC44 543 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 CPLX3Q8WVH0 158 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 EMID1Q96A84 441 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-209ENST00000511125 CCDC127Q96BQ5 260 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 APOL6Q9BWW8 343 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 DACH1Q9UI36 760 aa8.86□□□□□ -0.99
SMAD1-209ENST00000511125 IGHA2P01877 340 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 THPOP40225 353 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 MTIF2P46199 727 aaKnown RBP8.85□□□□□ -0.99
SMAD1-209ENST00000511125 ACOT2P49753 483 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 KNOP1Q1ED39 458 aaKnown RBP8.85□□□□□ -0.99
SMAD1-209ENST00000511125 CCDC40Q4G0X9 1142 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 DCAF17Q5H9S7 520 aaPredicted RBP8.85□□□□□ -0.99
SMAD1-209ENST00000511125 FILIP1Q7Z7B0 1213 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 TMEM161BQ8NDZ6 487 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 MAP7D2Q96T17 732 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 CRACR2AQ9BSW2 395 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 HSD3B7Q9H2F3 369 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 PDLIM7Q9NR12 457 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 ODF2LQ9ULJ1 636 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 LRRC37A2A6NM11 1700 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms