RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756	SMPD1	P17405	629 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	SFPQ	P23246	707 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
CAST-233	ENST00000510756	PSMC2	P35998	433 aa	Known RBP	13.45	□□□□□ -0.26
CAST-233	ENST00000510756	CDC42EP1	Q00587	391 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	TNFAIP2	Q03169	654 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	KIF22	Q14807	665 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	DGKD	Q16760	1214 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	MTERF2	Q49AM1	385 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	CYP4F22	Q6NT55	531 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	SPC24	Q8NBT2	197 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.45	□□□□□ -0.26
CAST-233	ENST00000510756	C2orf40	Q9H1Z8	148 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	TMX1	Q9H3N1	280 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	NDST4	Q9H3R1	872 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	SAGE1	Q9NXZ1	904 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	TAB2	Q9NYJ8	693 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	TBX20	Q9UMR3	447 aa		13.45	□□□□□ -0.26
CAST-233	ENST00000510756	MMP3	P08254	477 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	GART	P22102	1010 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	ADCYAP1R1	P41586	468 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	PEX3	P56589	373 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	ARHGEF6	Q15052	776 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	CCDC144B	Q3MJ40	725 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	NELFCD	Q8IXH7	590 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	BORCS6	Q96GS4	357 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	KIAA1586	Q9HCI6	787 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.44	□□□□□ -0.26
CAST-233	ENST00000510756	STYXL1	Q9Y6J8	313 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
CAST-233	ENST00000510756	RRN3P2	A6NIE6	340 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	SFI1	A8K8P3	1242 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	ZBTB42	B2RXF5	422 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	ZNF500	O60304	480 aa	Predicted RBP	13.44	□□□□□ -0.26
CAST-233	ENST00000510756	PTGS1	P23219	599 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	HOXD10	P28358	340 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	CPT1A	P50416	773 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	PRMT2	P55345	433 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	SP4	Q02446	784 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	UBXN1	Q04323	297 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	TBC1D8B	Q0IIM8	1120 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	CCDC40	Q4G0X9	1142 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	MFSD14C	Q5VZR4	134 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.44	□□□□□ -0.26
CAST-233	ENST00000510756	PPFIBP1	Q86W92	1011 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.44	□□□□□ -0.26
CAST-233	ENST00000510756	OR6J1	Q8NGC5	347 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	C16orf70	Q9BSU1	422 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	TELO2	Q9Y4R8	837 aa		13.44	□□□□□ -0.26
CAST-233	ENST00000510756	MSN	P26038	577 aa	Known RBP	13.43	□□□□□ -0.26
CAST-233	ENST00000510756	SYCP3	Q8IZU3	236 aa		13.43	□□□□□ -0.26
CAST-233	ENST00000510756	LINC01465	Q8N7H1	131 aa		13.43	□□□□□ -0.26
CAST-233	ENST00000510756	VPS16	Q9H269	839 aa		13.43	□□□□□ -0.26
CAST-233	ENST00000510756	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.43	□□□□□ -0.26
CAST-233	ENST00000510756	FRMD4B	Q9Y2L6	1034 aa		13.43	□□□□□ -0.26
CAST-233	ENST00000510756	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	P4HA2	O15460	535 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	TEX33	O43247	280 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	AKR1A1	P14550	325 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	POU5F1	Q01860	360 aa	Known RBP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	TFDP1	Q14186	410 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	SLFN12L	Q6IEE8	588 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	AFG1L	Q8WV93	481 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	PSPC1	Q8WXF1	523 aa	Known RBP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	COPS5	Q92905	334 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	UPF3A	Q9H1J1	476 aa	Known RBP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	TMEM150B	A6NC51	233 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	ADCY3	O60266	1144 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	DUSP11	O75319	330 aa	Known RBP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	GLRA2	P23416	452 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	SP3	Q02447	781 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	ZPBP2	Q6X784	338 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	INTS8	Q75QN2	995 aa	Known RBP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	CACTIN	Q8WUQ7	758 aa	Known RBP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	FBXL18	Q96ME1	805 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	KATNAL1	Q9BW62	490 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	NUCKS1	Q9H1E3	243 aa	Known RBP	13.42	□□□□□ -0.26
CAST-233	ENST00000510756	KCNF1	Q9H3M0	494 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	FBXL5	Q9UKA1	691 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	CAPN11	Q9UMQ6	739 aa		13.42	□□□□□ -0.26
CAST-233	ENST00000510756	DENND3	A2RUS2	1198 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	SLC16A4	O15374	487 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	STX10	O60499	249 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	N4BP1	O75113	896 aa	Known RBP	13.41	□□□□□ -0.26
CAST-233	ENST00000510756	F2	P00734	622 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	RPLP2	P05387	115 aa	Known RBP	13.41	□□□□□ -0.26
CAST-233	ENST00000510756	PSMC4	P43686	418 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
CAST-233	ENST00000510756	ARMCX5	Q6P1M9	558 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	USP37	Q86T82	979 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	XXYLT1	Q8NBI6	393 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.41	□□□□□ -0.26
CAST-233	ENST00000510756	PLCB1	Q9NQ66	1216 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	GPRC5C	Q9NQ84	441 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.41	□□□□□ -0.26
CAST-233	ENST00000510756	USP20	Q9Y2K6	914 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	CCDC169	A6NNP5	214 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	CCP110	O43303	1012 aa		13.41	□□□□□ -0.26
CAST-233	ENST00000510756	CDK17	Q00537	523 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms