RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SCARA5Q6ZMJ2 495 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 CCDC51Q96ER9 411 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 PPP1R12CQ9BZL4 782 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 LMBRD1Q9NUN5 540 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 PCDHB12Q9Y5F1 795 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 IGSF9BQ9UPX0 1349 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 CACNA1FO60840 1977 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 H7C4K7 107 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 GBP1P32455 592 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 NLRP11P59045 1033 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 KNOP1Q1ED39 458 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 NAALADL2Q58DX5 795 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 PLA2G4FQ68DD2 849 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 LRRC71Q8N4P6 559 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 GABPB2Q8TAK5 448 aaPredicted RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 SH3TC2Q8TF17 1288 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 CBX8Q9HC52 389 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 RBAKQ9NYW8 714 aaPredicted RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 MYO1AQ9UBC5 1043 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 DPP7Q9UHL4 492 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 HPS5Q9UPZ3 1129 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 BZW2Q9Y6E2 419 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 TUBB4AP04350 444 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TBXAS1P24557 533 aaPredicted RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 POLR2FP61218 127 aaKnown RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 CRHR2Q13324 411 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 BIRC2Q13490 618 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 MAP9Q49MG5 647 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TADA2BQ86TJ2 420 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 U2AF1L4Q8WU68 220 aaKnown RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 TMX1Q9H3N1 280 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 NLRC4Q9NPP4 1024 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 ENTPD7Q9NQZ7 604 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 GCNT4Q9P109 453 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 IKBKGQ9Y6K9 419 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 E7EVH7 732 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 URI1O94763 535 aaPredicted RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 SKILP12757 684 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CNTN2Q02246 1040 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TMTC1Q8IUR5 882 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 GRAMD1CQ8IYS0 662 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 ABRAQ8N0Z2 381 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 ATP8B4Q8TF62 1192 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TRMT1Q9NXH9 659 aaKnown RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 PCDHA5Q9Y5H7 936 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 NDC80O14777 642 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CD2BP2O95400 341 aaKnown RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 NPTXRO95502 500 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CD58P19256 250 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 RPA1P27694 616 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 GNG11P61952 73 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 GABPAQ06546 454 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TMEM132DQ14C87 1099 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 SNX17Q15036 470 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 LONRF3Q496Y0 759 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CELF3Q5SZQ8 465 aaKnown RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 SCYL2Q6P3W7 929 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 BTNL9Q6UXG8 535 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 SRGAP1Q7Z6B7 1085 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 BBS5Q8N3I7 341 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CEP63Q96MT8 703 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TUBGCP2Q9BSJ2 902 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TRIM62Q9BVG3 475 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 FAM204AQ9H8W3 233 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 KIF9Q9HAQ2 790 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TRPV2Q9Y5S1 764 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 ATRNL1Q5VV63 1379 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 A6NJR5 290 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 RSPH10B2B2RC85 870 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 GPR25O00155 361 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 RSPH10BP0C881 870 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CUL4BQ13620 913 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 IKBKEQ14164 716 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CCDC144BQ3MJ40 725 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 SV2CQ496J9 727 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CCSER1Q9C0I3 900 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 IMPACTQ9P2X3 320 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 MYZAPP0CAP1 466 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 ARP10275 920 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 KRT10P13645 584 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 OR1G1P47890 313 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 COPB1P53618 953 aaKnown RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 NOLC1Q14978 699 aaKnown RBP eCLIP5.55□□□□□ -1.52
PHF3-210ENST00000509876 DUOXA2Q1HG44 320 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TEX35Q5T0J7 233 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 GJC2Q5T442 439 aaPredicted RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 SPATA2LQ8IUW3 424 aaPredicted RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 SCN4BQ8IWT1 228 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 DCP1BQ8IZD4 617 aaKnown RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 APPL2Q8NEU8 664 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 MAIP1Q8WWC4 291 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 MRPL9Q9BYD2 267 aaKnown RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 UBE2TQ9NPD8 197 aaPredicted RBP5.55□□□□□ -1.52
PHF3-210ENST00000509876 RAB20Q9NX57 234 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 GUCA1BQ9UMX6 200 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 SLC10A3P09131 477 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 KCNA3P22001 575 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 RBP5P82980 135 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms