RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 GAS2O43903 313 aaKnown RBP26.46■■□□□ 1.83
ATP2C1-217ENST00000509662 LYPLA2O95372 231 aa26.46■■□□□ 1.83
ATP2C1-217ENST00000509662 PAN2Q504Q3 1202 aaKnown RBP26.46■■□□□ 1.83
ATP2C1-217ENST00000509662 IGSF22Q8N9C0 903 aa26.46■■□□□ 1.83
ATP2C1-217ENST00000509662 TCP11Q8WWU5 503 aa26.46■■□□□ 1.83
ATP2C1-217ENST00000509662 FDXACB1Q9BRP7 624 aaPredicted RBP26.46■■□□□ 1.83
ATP2C1-217ENST00000509662 COL25A1Q9BXS0 654 aaPredicted RBP26.46■■□□□ 1.83
ATP2C1-217ENST00000509662 ZSCAN16Q9H4T2 348 aaPredicted RBP26.46■■□□□ 1.83
ATP2C1-217ENST00000509662 NLRC5Q86WI3 1866 aa26.45■■□□□ 1.83
ATP2C1-217ENST00000509662 PDIA4P13667 645 aaKnown RBP26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 SFPQP23246 707 aaKnown RBP eCLIP26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 FAM173BQ6P4H8 233 aa26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 ZNF579Q8NAF0 562 aaKnown RBP26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 PSPC1Q8WXF1 523 aaKnown RBP26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 HLA-CQ95604 372 aa26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 CCDC43Q96MW1 224 aaKnown RBP26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 CHST12Q9NRB3 414 aa26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 ANKEF1Q9NU02 776 aa26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 DACT1Q9NYF0 836 aa26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 MRPL42Q9Y6G3 142 aaKnown RBP26.45■■□□□ 1.82
ATP2C1-217ENST00000509662 ASAP2O43150 1006 aa26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 HOXA2O43364 376 aa26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 SPATA31C1P0DKV0 1188 aa26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 PKP1Q13835 747 aa26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 BECN1Q14457 450 aa26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 NAALADL2Q58DX5 795 aa26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 PRPF31Q8WWY3 499 aaKnown RBP26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 NLRP4Q96MN2 994 aa26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 LMAN2LQ9H0V9 348 aa26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 COL4A3BPQ9Y5P4 624 aa26.44■■□□□ 1.82
ATP2C1-217ENST00000509662 MED24O75448 989 aa26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 BMP15O95972 392 aa26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 LINC00271P0C7V0 271 aa26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 XRCC6P12956 609 aaKnown RBP eCLIP26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 PDIA5Q14554 519 aa26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 SF3A1Q15459 793 aaKnown RBP26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 TIGD5Q53EQ6 642 aa26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 ARL6IP4Q66PJ3 421 aaKnown RBP26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 DTHD1Q6ZMT9 781 aa26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 ERMNQ8TAM6 284 aa26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 TMEM143Q96AN5 459 aa26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 POLR3CQ9BUI4 534 aaPredicted RBP26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 TUFT1Q9NNX1 390 aa26.43■■□□□ 1.82
ATP2C1-217ENST00000509662 TBKBP1A7MCY6 615 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 ZBTB39O15060 712 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 CSDE1O75534 798 aaKnown RBP26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 ZSCAN22P10073 491 aaPredicted RBP26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 FGFR4P22455 802 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 GATMP50440 423 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 EMC2Q15006 297 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 SPOUT1Q5T280 376 aaKnown RBP26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 FAM102BQ5T8I3 360 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 CATSPER3Q86XQ3 398 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 KSR1Q8IVT5 923 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 P2RX5Q93086 422 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 RAB34Q9BZG1 259 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 AAASQ9NRG9 546 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 LRWD1Q9UFC0 647 aa26.42■■□□□ 1.82
ATP2C1-217ENST00000509662 EOMESO95936 686 aa26.41■■□□□ 1.82
ATP2C1-217ENST00000509662 SRGAP2CP0DJJ0 459 aa26.41■■□□□ 1.82
ATP2C1-217ENST00000509662 RPA1P27694 616 aa26.41■■□□□ 1.82
ATP2C1-217ENST00000509662 HAUS3Q68CZ6 603 aa26.41■■□□□ 1.82
ATP2C1-217ENST00000509662 ECHDC2Q86YB7 292 aa26.41■■□□□ 1.82
ATP2C1-217ENST00000509662 MTRQ99707 1265 aa26.41■■□□□ 1.82
ATP2C1-217ENST00000509662 CLIC4Q9Y696 253 aa26.41■■□□□ 1.82
ATP2C1-217ENST00000509662 A0A0U1RQF3 1178 aa26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 PP2D1A8MPX8 630 aa26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 LAMTOR4Q0VGL1 99 aa26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 MXD4Q14582 209 aaPredicted RBP26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 PTPAQ15257 358 aa26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 CATSPER4Q7RTX7 472 aa26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 ABI1Q8IZP0 508 aa26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 TMEM117Q9H0C3 514 aa26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 BMP2KQ9NSY1 1161 aaPredicted RBP26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 PCDHB12Q9Y5F1 795 aa26.4■■□□□ 1.82
ATP2C1-217ENST00000509662 VWA3AA6NCI4 1184 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 DGAT1O75907 488 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 F13A1P00488 732 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 FGFR1P11362 822 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 SKIP12755 728 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 TFF2Q03403 129 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 FOXD4L5Q5VV16 416 aaPredicted RBP26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 POTEGQ6S5H5 508 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 SRGAP1Q7Z6B7 1085 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 RNF169Q8NCN4 708 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 FOXD4L4Q8WXT5 416 aaPredicted RBP26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 USP28Q96RU2 1077 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 NSUN3Q9H649 340 aaKnown RBP26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 IFT122Q9HBG6 1241 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 PLAGL2Q9UPG8 496 aa26.39■■□□□ 1.82
ATP2C1-217ENST00000509662 CUL9Q8IWT3 2517 aa26.38■■□□□ 1.81
ATP2C1-217ENST00000509662 GRM6O15303 877 aa26.38■■□□□ 1.81
ATP2C1-217ENST00000509662 MUTP22033 750 aa26.38■■□□□ 1.81
ATP2C1-217ENST00000509662 ECM1Q16610 540 aa26.38■■□□□ 1.81
ATP2C1-217ENST00000509662 TWF2Q6IBS0 349 aaKnown RBP26.38■■□□□ 1.81
ATP2C1-217ENST00000509662 SNX29Q8TEQ0 813 aa26.38■■□□□ 1.81
ATP2C1-217ENST00000509662 PIGOQ8TEQ8 1089 aa26.38■■□□□ 1.81
ATP2C1-217ENST00000509662 NACC1Q96RE7 527 aa26.38■■□□□ 1.81
ATP2C1-217ENST00000509662 MMTAG2Q9BU76 263 aaKnown RBP26.38■■□□□ 1.81
ATP2C1-217ENST00000509662 TRAIPQ9BWF2 469 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms