RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 TMEM62Q0P6H9 643 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 PPP2R5AQ15172 486 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 ECM1Q16610 540 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 FAM187BQ17R55 369 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 ZNF697Q5TEC3 545 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 RHPN2Q8IUC4 686 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 NLRP7Q8WX94 980 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 CCDC51Q96ER9 411 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 CALML4Q96GE6 196 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 CCDC43Q96MW1 224 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 USP28Q96RU2 1077 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 OSMRQ99650 979 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 FDXACB1Q9BRP7 624 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 ZNF576Q9H609 170 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 FBXO2Q9UK22 296 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 ATP6V1DQ9Y5K8 247 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 PHLPP2Q6ZVD8 1323 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 RALGAPA2Q2PPJ7 1873 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 FNDC1Q4ZHG4 1894 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 GRXCR1A8MXD5 290 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 TLL1O43897 1013 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 DGKIO75912 1065 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 ZSCAN20P17040 1043 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 NAMPTP43490 491 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 PHKA2P46019 1235 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 EFNA5P52803 228 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 NCBP1Q09161 790 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 NFX1Q12986 1120 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 TMEM119Q4V9L6 283 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 C1orf186Q6ZWK4 172 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 CABP7Q86V35 215 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 DEFB123Q8N688 67 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 KRI1Q8N9T8 703 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 TMEM143Q96AN5 459 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 PRIMPOLQ96LW4 560 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 ADAM2Q99965 735 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 SH2D3AQ9BRG2 576 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 ZBED2Q9BTP6 218 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 BHMT2Q9H2M3 363 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 RC3H2Q9HBD1 1191 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 TMEM161AQ9NX61 479 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 RCOR1Q9UKL0 485 aa11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-213ENST00000508848 COL6A3P12111 3177 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 HOXA2O43364 376 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 GLRA2P23416 452 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 CDC25AP30304 524 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 ABCD1P33897 745 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 DDIT3P35638 169 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 PBX2P40425 430 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 RAB27AP51159 221 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 ERVK-21P61565 698 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 TAP1Q03518 808 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 GRB10Q13322 594 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 NAALADL2Q58DX5 795 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 CDCA2Q69YH5 1023 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 RINT1Q6NUQ1 792 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 MYOCDQ8IZQ8 938 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 RNF149Q8NC42 400 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 CNNM3Q8NE01 707 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 KCNG4Q8TDN1 519 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 LINC01599Q8WXQ3 324 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 CLP1Q92989 425 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 DRC1Q96MC2 740 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 PNMA5Q96PV4 448 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 C2orf40Q9H1Z8 148 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 TTYH1Q9H313 450 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 AGPAT5Q9NUQ2 364 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 LMCD1Q9NZU5 365 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 GINS2Q9Y248 185 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 YBX2Q9Y2T7 364 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 RWDD3Q9Y3V2 267 aa11.75□□□□□ -0.53
POLR2J3-213ENST00000508848 DENND3A2RUS2 1198 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 PP2D1A8MPX8 630 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 SPTLC2O15270 562 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 SLC34A2O95436 690 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 RB1P06400 928 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 SRGAP2CP0DJJ0 459 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 HOXA11P31270 313 aaPredicted RBP11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 SLC12A3P55017 1021 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 NUCB2P80303 420 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 CAPSQ13938 189 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 MRPL10Q7Z7H8 261 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 KSR1Q8IVT5 923 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 CMTR2Q8IYT2 770 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 CDK5RAP3Q96JB5 506 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 IFT74Q96LB3 600 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 TGS1Q96RS0 853 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 CSRNP2Q9H175 543 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 FZD8Q9H461 694 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 TMEM134Q9H6X4 195 aa11.74□□□□□ -0.53
POLR2J3-213ENST00000508848 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms