RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 SFPQP23246 707 aaKnown RBP eCLIP26.12■■□□□ 1.77
CSNK1G3-204ENST00000508708 LAMTOR4Q0VGL1 99 aa26.12■■□□□ 1.77
CSNK1G3-204ENST00000508708 GPM6BQ13491 265 aa26.12■■□□□ 1.77
CSNK1G3-204ENST00000508708 FAM102BQ5T8I3 360 aa26.12■■□□□ 1.77
CSNK1G3-204ENST00000508708 FERMT3Q86UX7 667 aa26.12■■□□□ 1.77
CSNK1G3-204ENST00000508708 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.12■■□□□ 1.77
CSNK1G3-204ENST00000508708 THEGQ9P2T0 379 aa26.12■■□□□ 1.77
CSNK1G3-204ENST00000508708 DGAT1O75907 488 aa26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 XRCC6P12956 609 aaKnown RBP eCLIP26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 ZSCAN20P17040 1043 aaPredicted RBP26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 RPA1P27694 616 aa26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 PTGDRQ13258 359 aa26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 MCTP1Q6DN14 999 aa26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 POTEGQ6S5H5 508 aa26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 TCP11Q8WWU5 503 aa26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 MRPL38Q96DV4 380 aaKnown RBP26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 INO80BQ9C086 356 aaPredicted RBP26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 RNF216Q9NWF9 866 aaPredicted RBP26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 MYO7AQ13402 2215 aa26.11■■□□□ 1.77
CSNK1G3-204ENST00000508708 A0A087WWV3 80 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 H3BQV1 296 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 FGFR1P11362 822 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 ATF7P17544 494 aaPredicted RBP26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 ZNF598Q86UK7 904 aaKnown RBP26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 ECHDC2Q86YB7 292 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 IGSF22Q8N9C0 903 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 TRAIPQ9BWF2 469 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 PLVAPQ9BX97 442 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 MINDY3Q9H8M7 445 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 ATP6V0A4Q9HBG4 840 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 CHST12Q9NRB3 414 aa26.1■■□□□ 1.77
CSNK1G3-204ENST00000508708 A0A0U1RQF3 1178 aa26.09■■□□□ 1.77
CSNK1G3-204ENST00000508708 LAD1O00515 517 aa26.09■■□□□ 1.77
CSNK1G3-204ENST00000508708 IL17AQ16552 155 aa26.09■■□□□ 1.77
CSNK1G3-204ENST00000508708 RILPL1Q5EBL4 403 aa26.09■■□□□ 1.77
CSNK1G3-204ENST00000508708 ERMNQ8TAM6 284 aa26.09■■□□□ 1.77
CSNK1G3-204ENST00000508708 C11orf84Q9BUA3 381 aaPredicted RBP26.09■■□□□ 1.77
CSNK1G3-204ENST00000508708 HCSTQ9UBK5 93 aa26.09■■□□□ 1.77
CSNK1G3-204ENST00000508708 DBR1Q9UK59 544 aaKnown RBP26.09■■□□□ 1.77
CSNK1G3-204ENST00000508708 ASAP2O43150 1006 aa26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 ARL2P36404 184 aa26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 ECM1Q16610 540 aa26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 HAUS3Q68CZ6 603 aa26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 SRGAP1Q7Z6B7 1085 aa26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 RNF149Q8NC42 400 aa26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 ASAP3Q8TDY4 903 aa26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 AGPAT5Q9NUQ2 364 aa26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 DACT1Q9NYF0 836 aa26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 PIN4Q9Y237 131 aaKnown RBP26.08■■□□□ 1.77
CSNK1G3-204ENST00000508708 TBKBP1A7MCY6 615 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 GRM6O15303 877 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 SRGAP2CP0DJJ0 459 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 MUTP22033 750 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 PRPHP41219 470 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 PTPROQ16827 1216 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 LARP1BQ659C4 914 aaKnown RBP26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 CATSPER4Q7RTX7 472 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 ATXN2LQ8WWM7 1075 aaKnown RBP26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 P2RX5Q93086 422 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 CCDC43Q96MW1 224 aaKnown RBP26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 CASD1Q96PB1 797 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 NACC1Q96RE7 527 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 TMEM117Q9H0C3 514 aa26.07■■□□□ 1.76
CSNK1G3-204ENST00000508708 USO1O60763 962 aaKnown RBP26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 GLRA2P23416 452 aa26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 PHKA2P46019 1235 aa26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 PTENP60484 403 aa26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 ATP2C1P98194 919 aaPredicted RBP26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 CAPSQ13938 189 aa26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 PDIA5Q14554 519 aa26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 MXD4Q14582 209 aaPredicted RBP26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 CLLU1OSQ5K130 101 aa26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 IFNLR1Q8IU57 520 aaPredicted RBP26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 LMAN2LQ9H0V9 348 aa26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 LRWD1Q9UFC0 647 aa26.06■■□□□ 1.76
CSNK1G3-204ENST00000508708 HOXA2O43364 376 aa26.05■■□□□ 1.76
CSNK1G3-204ENST00000508708 POU5F1BQ06416 359 aa26.05■■□□□ 1.76
CSNK1G3-204ENST00000508708 CAMK1Q14012 370 aa26.05■■□□□ 1.76
CSNK1G3-204ENST00000508708 SKIV2LQ15477 1246 aaKnown RBP26.05■■□□□ 1.76
CSNK1G3-204ENST00000508708 TIGD5Q53EQ6 642 aa26.05■■□□□ 1.76
CSNK1G3-204ENST00000508708 COL25A1Q9BXS0 654 aaPredicted RBP26.05■■□□□ 1.76
CSNK1G3-204ENST00000508708 GPRC5CQ9NQ84 441 aa26.05■■□□□ 1.76
CSNK1G3-204ENST00000508708 PLAGL2Q9UPG8 496 aa26.05■■□□□ 1.76
CSNK1G3-204ENST00000508708 EOMESO95936 686 aa26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 ITGB1P05556 798 aa26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 HOXA11P31270 313 aaPredicted RBP26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 CCT6AP40227 531 aaKnown RBP26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 NAALADL2Q58DX5 795 aa26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 TWF2Q6IBS0 349 aaKnown RBP26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 LRRC55Q6ZSA7 311 aa26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 NFKBIZQ9BYH8 718 aa26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 POLR3FQ9H1D9 316 aaPredicted RBP26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 CWH43Q9H720 699 aa26.04■■□□□ 1.76
CSNK1G3-204ENST00000508708 PP2D1A8MPX8 630 aa26.03■■□□□ 1.76
CSNK1G3-204ENST00000508708 TFF2Q03403 129 aa26.03■■□□□ 1.76
CSNK1G3-204ENST00000508708 TJAP1Q5JTD0 557 aa26.03■■□□□ 1.76
CSNK1G3-204ENST00000508708 KLHL23Q8NBE8 558 aa26.03■■□□□ 1.76
CSNK1G3-204ENST00000508708 SNX29Q8TEQ0 813 aa26.03■■□□□ 1.76
CSNK1G3-204ENST00000508708 ASB2Q96Q27 587 aa26.03■■□□□ 1.76
CSNK1G3-204ENST00000508708 RAB34Q9BZG1 259 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms