RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MLXIPQ9HAP2 919 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 PARVGQ9HBI0 331 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 RNF216Q9NWF9 866 aaPredicted RBP12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 HOXC10Q9NYD6 342 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 BZW2Q9Y6E2 419 aaKnown RBP12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 HSF2BPO75031 334 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 RGS20O76081 388 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 P4HBP07237 508 aaKnown RBP12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 MUTP22033 750 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 MAGEA9P43362 315 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 KCNMA1Q12791 1236 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 NAB2Q15742 525 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 IFI16Q16666 785 aaKnown RBP12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 HGSNATQ68CP4 663 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 USP50Q70EL3 339 aaPredicted RBP12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 MAEAQ7L5Y9 396 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 VSIG10LQ86VR7 867 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 KSR1Q8IVT5 923 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 FIZ1Q96SL8 496 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 ACAD9Q9H845 621 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 TBC1D22BQ9NU19 505 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 AIPL1Q9NZN9 384 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 TRAF3IP3Q9Y228 551 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 CLEC11AQ9Y240 323 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 ZMYM2Q9UBW7 1377 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 ATP8B3O60423 1300 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 ARHGEF35A5YM69 484 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 POTEJP0CG39 1038 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 GAP43P17677 238 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 CCND2P30279 289 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 SLC18A3Q16572 532 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 BMT2Q1RMZ1 405 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 TDRD12Q587J7 1177 aaKnown RBP12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 KLHDC7AQ5VTJ3 777 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 GPIHBP1Q8IV16 184 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 TRIM59Q8IWR1 403 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 ZC3H3Q8IXZ2 948 aaKnown RBP12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 DAW1Q8N136 415 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 C1orf131Q8NDD1 294 aaKnown RBP12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 NEK9Q8TD19 979 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 TLR10Q9BXR5 811 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 TELO2Q9Y4R8 837 aa12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.01□□□□□ -0.49
SH3RF1-203ENST00000508685 HIP1RO75146 1068 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 ZMYND10O75800 440 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 MYBL2P10244 700 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 QARSP47897 775 aaKnown RBP12□□□□□ -0.49
SH3RF1-203ENST00000508685 ZNF131P52739 623 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 NAP1L1P55209 391 aaKnown RBP12□□□□□ -0.49
SH3RF1-203ENST00000508685 MAPK7Q13164 816 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 PAK2Q13177 524 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 ODR4Q5SWX8 454 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 NFRKBQ6P4R8 1299 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 PADI6Q6TGC4 694 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 NSUN6Q8TEA1 469 aaKnown RBP12□□□□□ -0.49
SH3RF1-203ENST00000508685 CDCA5Q96FF9 252 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 INPP4AQ96PE3 977 aaPredicted RBP12□□□□□ -0.49
SH3RF1-203ENST00000508685 RSPH14Q9UHP6 348 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 DMGDHQ9UI17 866 aaKnown RBP12□□□□□ -0.49
SH3RF1-203ENST00000508685 MYPNQ86TC9 1320 aa12□□□□□ -0.49
SH3RF1-203ENST00000508685 PDXKO00764 312 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 CETN3O15182 167 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 CLIC2O15247 247 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 TGFB1I1O43294 461 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 SORBS3O60504 671 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 AKAP3O75969 853 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 GUCY2CP25092 1073 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 YWHABP31946 246 aaKnown RBP11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 IREB2P48200 963 aaKnown RBP11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 RARRES1P49788 294 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 CORO7P57737 925 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 SKOR1P84550 965 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 GFPT1Q06210 699 aaPredicted RBP11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 GADL1Q6ZQY3 521 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 FAM178BQ8IXR5 827 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 MREGQ8N565 214 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 PPM1EQ8WY54 764 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 CAPS2Q9BXY5 557 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 GDF3Q9NR23 364 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 TYW1Q9NV66 732 aaKnown RBP11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 KCND2Q9NZV8 630 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 BTBD7Q9P203 1132 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 TCEAL9Q9UHQ7 104 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 ODF2LQ9ULJ1 636 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 PCDHGC5Q9Y5F6 944 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 LOC285556D6RIA3 1793 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 LCTP09848 1927 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 WDR64B1ANS9 1081 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 NR3C1P04150 777 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 CASP4P49662 377 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 TNNC1P63316 161 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 CNTN2Q02246 1040 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 SP4Q02446 784 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 LBX2Q6XYB7 198 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 ZNF720Q7Z2F6 126 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 FRMD5Q7Z6J6 570 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 SPATS2Q86XZ4 545 aaKnown RBP11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 EFCAB13Q8IY85 973 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 C10orf67Q8IYJ2 551 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms