RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PPP1R18Q6NYC8 613 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 ZNF598Q86UK7 904 aaKnown RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 METTL13Q8N6R0 699 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 LINC01465Q8N7H1 131 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 C12orf76Q8N812 135 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 FANCBQ8NB91 859 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 SUMF1Q8NBK3 374 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 SLC22A17Q8WUG5 538 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 ACSF2Q96CM8 615 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 TMEM169Q96HH4 297 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 ZBP1Q9H171 429 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 ADAMTS10Q9H324 1103 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 SH2B1Q9NRF2 756 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 CDV3Q9UKY7 258 aaKnown RBP10.66□□□□□ -0.7
NEDD9-211ENST00000508546 DUSP12Q9UNI6 340 aa10.66□□□□□ -0.7
NEDD9-211ENST00000508546 ZZEF1O43149 2961 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-211ENST00000508546 DDX39AO00148 427 aaKnown RBP10.65□□□□□ -0.7
NEDD9-211ENST00000508546 TMOD1P28289 359 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 ZNF76P36508 570 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 CLK2P49760 499 aaKnown RBP10.65□□□□□ -0.7
NEDD9-211ENST00000508546 METAP2P50579 478 aaKnown RBP eCLIP10.65□□□□□ -0.7
NEDD9-211ENST00000508546 CLCN3P51790 818 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 BCAR1P56945 870 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 WWC2Q6AWC2 1192 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 TYW1BQ6NUM6 668 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 ZNF746Q6NUN9 644 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-211ENST00000508546 ZC3H14Q6PJT7 736 aaKnown RBP10.65□□□□□ -0.7
NEDD9-211ENST00000508546 OTOP3Q7RTS5 596 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 GPR149Q86SP6 731 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 DDX53Q86TM3 631 aaKnown RBP10.65□□□□□ -0.7
NEDD9-211ENST00000508546 SGMS1Q86VZ5 419 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 PPFIBP1Q86W92 1011 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 CKAP2LQ8IYA6 745 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 VPS52Q8N1B4 723 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 CCDC82Q8N4S0 544 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 PGBD1Q96JS3 809 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 MAP7D2Q96T17 732 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 GLT8D2Q9H1C3 349 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 DACT1Q9NYF0 836 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 RBM8AQ9Y5S9 174 aaKnown RBP10.65□□□□□ -0.7
NEDD9-211ENST00000508546 SLC12A7Q9Y666 1083 aa10.65□□□□□ -0.7
NEDD9-211ENST00000508546 MIA3Q5JRA6 1907 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 CNTNAP5Q8WYK1 1306 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 IGLV3-22A0A075B6J6 115 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 NT5C1B-RDH14C9J2C7 533 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 FAM86B1E9PN63 330 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 hCG_1984214I3L0E3 225 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 IPO5O00410 1097 aaKnown RBP10.64□□□□□ -0.71
NEDD9-211ENST00000508546 CYP3A4P08684 503 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 FAM86B2P0C5J1 330 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 EPCAMP16422 314 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 CA8P35219 290 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 ADCY7P51828 1080 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 NAPAP54920 295 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 EFCAB12Q6NXP0 572 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 KANK3Q6NY19 840 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 CCDC149Q6ZUS6 474 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 CABP7Q86V35 215 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 PLA2G4DQ86XP0 818 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 SMAP1Q8IYB5 467 aaPredicted RBP10.64□□□□□ -0.71
NEDD9-211ENST00000508546 SIX5Q8N196 739 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 ZNF713Q8N859 430 aaPredicted RBP10.64□□□□□ -0.71
NEDD9-211ENST00000508546 TMEM87AQ8NBN3 555 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 RNF169Q8NCN4 708 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 CRYGNQ8WXF5 182 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 IGSF21Q96ID5 467 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 FAM167AQ96KS9 214 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 TRAIPQ9BWF2 469 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 SFXN1Q9H9B4 322 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 TBC1D22BQ9NU19 505 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 IGSF9Q9P2J2 1179 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 AKT3Q9Y243 479 aa10.64□□□□□ -0.71
NEDD9-211ENST00000508546 SMCO2A6NFE2 343 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 PSAPP07602 524 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 SP9P0CG40 484 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 DARSP14868 501 aaKnown RBP10.63□□□□□ -0.71
NEDD9-211ENST00000508546 GPC3P51654 580 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 COL9A3Q14050 684 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-211ENST00000508546 TMC5Q6UXY8 1006 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 C15orf39Q6ZRI6 1047 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 TMEM173Q86WV6 379 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-211ENST00000508546 AUTS2Q8WXX7 1259 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 KCNK12Q9HB15 430 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 CHST12Q9NRB3 414 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 RBM28Q9NW13 759 aaKnown RBP10.63□□□□□ -0.71
NEDD9-211ENST00000508546 WNT16Q9UBV4 365 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 PCDHA10Q9Y5I2 948 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 IGF2RP11717 2491 aa10.63□□□□□ -0.71
NEDD9-211ENST00000508546 FLNBO75369 2602 aaKnown RBP10.62□□□□□ -0.71
NEDD9-211ENST00000508546 ZC3H11AO75152 810 aaKnown RBP eCLIP10.62□□□□□ -0.71
NEDD9-211ENST00000508546 GALTP07902 379 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 SDHBP21912 280 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 SETQ01105 290 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-211ENST00000508546 LMNB2Q03252 620 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 DMWDQ09019 674 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 FUT2Q10981 343 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 TRMT1LQ7Z2T5 733 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms