RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 IFT22Q9H7X7 185 aa7.15□□□□□ -1.26
DHFR-204ENST00000508282 MSL2Q9HCI7 577 aa7.15□□□□□ -1.26
DHFR-204ENST00000508282 RBM8AQ9Y5S9 174 aaKnown RBP7.15□□□□□ -1.26
DHFR-204ENST00000508282 PMS2P1A4D2B8 440 aa7.14□□□□□ -1.27
DHFR-204ENST00000508282 PCDH8O95206 1070 aa7.14□□□□□ -1.27
DHFR-204ENST00000508282 HNRNPLP14866 589 aaKnown RBP eCLIP7.14□□□□□ -1.273e-6■■■□□ 17.7
DHFR-204ENST00000508282 RPS19P39019 145 aaKnown RBP7.14□□□□□ -1.27
DHFR-204ENST00000508282 STRN3Q13033 797 aa7.14□□□□□ -1.27
DHFR-204ENST00000508282 R3HDM1Q15032 1099 aaKnown RBP7.14□□□□□ -1.27
DHFR-204ENST00000508282 EGFLAMQ63HQ2 1017 aa7.14□□□□□ -1.27
DHFR-204ENST00000508282 CLEC14AQ86T13 490 aa7.14□□□□□ -1.27
DHFR-204ENST00000508282 MYPNQ86TC9 1320 aa7.14□□□□□ -1.27
DHFR-204ENST00000508282 CXorf67Q86X51 503 aaPredicted RBP7.14□□□□□ -1.27
DHFR-204ENST00000508282 RABGGTAQ92696 567 aa7.14□□□□□ -1.27
DHFR-204ENST00000508282 TCAF1Q9Y4C2 921 aa7.14□□□□□ -1.27
DHFR-204ENST00000508282 PRSS38A1L453 326 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 C1QTNF3-AMACRE9PGA6 284 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 MAFGO15525 162 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 KDM1AO60341 852 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 PFKMP08237 780 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 COMTP21964 271 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 SOX5P35711 763 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 ADAM8P78325 824 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 TCIRG1Q13488 830 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 Q6ZSN1 163 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 FRMD7Q6ZUT3 714 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 GGNQ86UU5 652 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 AFAP1L2Q8N4X5 818 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 SHCBP1Q8NEM2 672 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 CHAC2Q8WUX2 184 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 GCDHQ92947 438 aaPredicted RBP7.13□□□□□ -1.27
DHFR-204ENST00000508282 FERMT2Q96AC1 680 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 GPHA2Q96T91 129 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 TTC1Q99614 292 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 SLC6A15Q9H2J7 730 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 SYNPO2Q9UMS6 1093 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 TSC22D4Q9Y3Q8 395 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 PPP2R3BQ9Y5P8 575 aa7.13□□□□□ -1.27
DHFR-204ENST00000508282 ZEB2O60315 1214 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 CLSTN1O94985 981 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 INSRRP14616 1297 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 BPIFB4P59827 614 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 FOXL1Q12952 345 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 RIN1Q13671 783 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 RASSF3Q86WH2 238 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 PALM2Q8IXS6 379 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 ANKRD53Q8N9V6 530 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 PLA2G15Q8NCC3 412 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 HIST1H2AHQ96KK5 128 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 HIST1H2AJQ99878 128 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 ANO3Q9BYT9 981 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 NELFAQ9H3P2 528 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.12□□□□□ -1.271e-6■■□□□ 14
DHFR-204ENST00000508282 PLA2G3Q9NZ20 509 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 TMPRSS11EQ9UL52 423 aa7.12□□□□□ -1.27
DHFR-204ENST00000508282 ST20-MTHFSA0A0A6YYL1 179 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 RAB11FIP3O75154 756 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 VIL1P09327 827 aaKnown RBP7.11□□□□□ -1.27
DHFR-204ENST00000508282 MSX2P35548 267 aaPredicted RBP7.11□□□□□ -1.27
DHFR-204ENST00000508282 MANFP55145 182 aaKnown RBP7.11□□□□□ -1.27
DHFR-204ENST00000508282 GRM7Q14831 915 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 ZXDCQ2QGD7 858 aaPredicted RBP7.11□□□□□ -1.27
DHFR-204ENST00000508282 HS1BP3Q53T59 392 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 DBX2Q6ZNG2 339 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 POLNQ7Z5Q5 900 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 LYSMD2Q8IV50 215 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 PPP1R14CQ8TAE6 165 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 RPL10LQ96L21 214 aaKnown RBP7.11□□□□□ -1.27
DHFR-204ENST00000508282 OSBPL6Q9BZF3 934 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 NOC2LQ9Y3T9 749 aaKnown RBP7.11□□□□□ -1.27
DHFR-204ENST00000508282 PCDHB6Q9Y5E3 794 aa7.11□□□□□ -1.27
DHFR-204ENST00000508282 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.1□□□□□ -1.27
DHFR-204ENST00000508282 MUSKO15146 869 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 TOX4O94842 621 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 CLEC2LP0C7M8 214 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 ACO1P21399 889 aaKnown RBP7.1□□□□□ -1.27
DHFR-204ENST00000508282 PDCD1Q15116 288 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 ADGRE4PQ86SQ3 457 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 CDYL2Q8N8U2 506 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 CLRN3Q8NCR9 226 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 EDAQ92838 391 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 TMEM176AQ96HP8 235 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 ADOQ96SZ5 270 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 CDK5RAP1Q96SZ6 601 aaKnown RBP7.1□□□□□ -1.27
DHFR-204ENST00000508282 PRDM12Q9H4Q4 367 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 TOPORSQ9NS56 1045 aaPredicted RBP7.1□□□□□ -1.27
DHFR-204ENST00000508282 USP18Q9UMW8 372 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 APOBEC2Q9Y235 224 aaKnown RBP7.1□□□□□ -1.27
DHFR-204ENST00000508282 MYRFQ9Y2G1 1151 aa7.1□□□□□ -1.27
DHFR-204ENST00000508282 DAPK3O43293 454 aa7.09□□□□□ -1.27
DHFR-204ENST00000508282 EYA4O95677 639 aa7.09□□□□□ -1.27
DHFR-204ENST00000508282 VSIG10L2P0DP72 767 aa7.09□□□□□ -1.27
DHFR-204ENST00000508282 GAGE13Q4V321 117 aa7.09□□□□□ -1.27
DHFR-204ENST00000508282 CT47A1Q5JQC4 288 aaPredicted RBP7.09□□□□□ -1.27
DHFR-204ENST00000508282 MAMDC4Q6UXC1 1216 aa7.09□□□□□ -1.27
DHFR-204ENST00000508282 KRT26Q7Z3Y9 468 aa7.09□□□□□ -1.27
DHFR-204ENST00000508282 HDGFL2Q7Z4V5 671 aaPredicted RBP7.09□□□□□ -1.27
DHFR-204ENST00000508282 BORCS6Q96GS4 357 aa7.09□□□□□ -1.27
DHFR-204ENST00000508282 FDXACB1Q9BRP7 624 aaPredicted RBP7.09□□□□□ -1.27
DHFR-204ENST00000508282 C14orf93Q9H972 538 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms