RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
PROM1-207ENST00000508167 MYMKA6NI61 221 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 RRN3P2A6NIE6 340 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 CABYRO75952 493 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 SMIM10L2AP0DMW4 78 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 SMIM10L2BP0DMW5 78 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 PURAQ00577 322 aaKnown RBP12.11□□□□□ -0.47
PROM1-207ENST00000508167 ZNF484Q5JVG2 852 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 RINT1Q6NUQ1 792 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 B3GNT9Q6UX72 402 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 DRC7Q8IY82 874 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 DEPTORQ8TB45 409 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 DRC1Q96MC2 740 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 C7orf25Q9BPX7 421 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 CYP2C9P11712 490 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 MATR3P43243 847 aaKnown RBP eCLIP12.11□□□□□ -0.47
PROM1-207ENST00000508167 TMEM62Q0P6H9 643 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 DMP1Q13316 513 aaPredicted RBP12.11□□□□□ -0.47
PROM1-207ENST00000508167 HYIQ5T013 277 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 RHPN2Q8IUC4 686 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 FAM178BQ8IXR5 827 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 SYCP3Q8IZU3 236 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 C16orf70Q9BSU1 422 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 TRIM9Q9C026 710 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 TTYH3Q9C0H2 523 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 TRIM49BA6NDI0 452 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 MAGEB2O15479 319 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 HIP1RO75146 1068 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 LGR5O75473 907 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 CLCN3P51790 818 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 PEX3P56589 373 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 SOX10P56693 466 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 NCBP1Q09161 790 aaKnown RBP12.11□□□□□ -0.47
PROM1-207ENST00000508167 ITGA7Q13683 1181 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 STXBP4Q6ZWJ1 553 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 RSPH3Q86UC2 560 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 KCTD17Q8N5Z5 321 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 PSPC1Q8WXF1 523 aaKnown RBP12.11□□□□□ -0.47
PROM1-207ENST00000508167 BICD1Q96G01 975 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 POLR3FQ9H1D9 316 aaPredicted RBP12.11□□□□□ -0.47
PROM1-207ENST00000508167 DBR1Q9UK59 544 aaKnown RBP12.11□□□□□ -0.47
PROM1-207ENST00000508167 CTNND2Q9UQB3 1225 aa12.11□□□□□ -0.47
PROM1-207ENST00000508167 IGSF9BQ9UPX0 1349 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 GCNT3O95395 438 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 SGPL1O95470 568 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 GJB1P08034 283 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 CYP11B2P19099 503 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 NAA30Q147X3 362 aaPredicted RBP12.1□□□□□ -0.47
PROM1-207ENST00000508167 KRT31Q15323 416 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 SPECC1LQ69YQ0 1117 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 TOGARAM2Q6ZUX3 1019 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 AFAP1L1Q8TED9 768 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 REEP2Q9BRK0 252 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 PARVGQ9HBI0 331 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 MOXD2PA6NHM9 499 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 CCDC85CA6NKD9 419 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 RFC5P40937 340 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 TCP11Q8WWU5 503 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 ZNF333Q96JL9 665 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 SLC39A2Q9NP94 309 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 SUCLA2Q9P2R7 463 aaPredicted RBP12.1□□□□□ -0.47
PROM1-207ENST00000508167 PCDHA2Q9Y5H9 948 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 KIAA1217Q5T5P2 1943 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 PQBP1O60828 265 aaKnown RBP12.1□□□□□ -0.47
PROM1-207ENST00000508167 ADAMTS4O75173 837 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 LYPLA2O95372 231 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 F2P00734 622 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 STX17P56962 302 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 MTF1Q14872 753 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 NRCAMQ92823 1304 aa12.1□□□□□ -0.47
PROM1-207ENST00000508167 K7ENM7 598 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 FXR1P51114 621 aaKnown RBP eCLIP12.09□□□□□ -0.47
PROM1-207ENST00000508167 NFRKBQ6P4R8 1299 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 CTSHP09668 335 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 TNNT1P13805 278 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 ATP4AP20648 1035 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 FAM26FQ5R3K3 315 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 RAD9BQ6WBX8 426 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 KMT5AQ9NQR1 393 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 MGAMO43451 1857 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 RSPH10B2B2RC85 870 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 INO80B-WBP1J3KQ70 363 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 RSPH10BP0C881 870 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 SLC12A3P55017 1021 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 PPP2R5AQ15172 486 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 TCP11X2Q5H9J9 407 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 MIIPQ5JXC2 388 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 LHX8Q68G74 356 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 SFR1Q86XK3 245 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 LMBR1Q8WVP7 490 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 KIFAP3Q92845 792 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 TCHPQ9BT92 498 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 INO80BQ9C086 356 aaPredicted RBP12.09□□□□□ -0.47
PROM1-207ENST00000508167 ATP11BQ9Y2G3 1177 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 LRRC37A2A6NM11 1700 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 LOXHD1Q8IVV2 1947 aa12.09□□□□□ -0.47
PROM1-207ENST00000508167 IGKV6D-21A0A0A0MT36 114 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms