RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 KSR1Q8IVT5 923 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 SNX21Q969T3 373 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 C17orf80Q9BSJ5 609 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 C11orf84Q9BUA3 381 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-211ENST00000507689 FOXD4L1Q9NU39 408 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 LMCD1Q9NZU5 365 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 DNM3Q9UQ16 869 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 TBKBP1A7MCY6 615 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 C9IYK1 514 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 RFXAPO00287 272 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 MGEA5O60502 916 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 SPATA31C1P0DKV0 1188 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 PDIA4P13667 645 aaKnown RBP17.37■□□□□ 0.37
COL1A1-211ENST00000507689 FGFR4P22455 802 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 RAB27AP51159 221 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 GRB10Q13322 594 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 GPM6BQ13491 265 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 ADGRE1Q14246 886 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 ZRSR1Q15695 479 aaKnown RBP17.37■□□□□ 0.37
COL1A1-211ENST00000507689 FAM102BQ5T8I3 360 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 ARL6IP4Q66PJ3 421 aaKnown RBP17.37■□□□□ 0.37
COL1A1-211ENST00000507689 C4orf32Q8N8J7 132 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 RASSF8Q8NHQ8 419 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 GDPD5Q8WTR4 605 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 POLR3FQ9H1D9 316 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-211ENST00000507689 KIAA1024Q9UPX6 916 aa17.37■□□□□ 0.37
COL1A1-211ENST00000507689 VWA3AA6NCI4 1184 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 CSDE1O75534 798 aaKnown RBP17.36■□□□□ 0.37
COL1A1-211ENST00000507689 ARHGEF15O94989 841 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 EOMESO95936 686 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 BMPR1AP36894 532 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 ATP2C1P98194 919 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-211ENST00000507689 DSC3Q14574 896 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 PADI6Q6TGC4 694 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 MAEAQ7L5Y9 396 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 ZBTB8OSQ8IWT0 167 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 IGSF22Q8N9C0 903 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 ZNF689Q96CS4 500 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-211ENST00000507689 IFT74Q96LB3 600 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 PLVAPQ9BX97 442 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 NT5C3AQ9H0P0 336 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 DDX19AQ9NUU7 478 aaKnown RBP17.36■□□□□ 0.37
COL1A1-211ENST00000507689 PCDHB12Q9Y5F1 795 aa17.36■□□□□ 0.37
COL1A1-211ENST00000507689 SZT2Q5T011 3432 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 PTPRSQ13332 1948 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 INO80B-WBP1J3KQ70 363 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 POU3F3P20264 500 aaPredicted RBP17.35■□□□□ 0.37
COL1A1-211ENST00000507689 FAM189BP81408 668 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 POU5F1BQ06416 359 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 PPP2R5AQ15172 486 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 CSPP1Q1MSJ5 1256 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 TMEM132AQ24JP5 1023 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 ECHDC2Q86YB7 292 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL1A1-211ENST00000507689 RSPH1Q8WYR4 309 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 TMEM117Q9H0C3 514 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 MTCH2Q9Y6C9 303 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 LOXHD1Q8IVV2 1947 aa17.35■□□□□ 0.37
COL1A1-211ENST00000507689 A0A087WWV3 80 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 A0A0U1RQF3 1178 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 EPOPA6NHQ4 379 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 LRRIQ4A6NIV6 560 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 H3BNC9 293 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 SYT1P21579 422 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 AXLP30530 894 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 COL4A6Q14031 1691 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 NAALADL2Q58DX5 795 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 HACE1Q8IYU2 909 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 KCTD17Q8N5Z5 321 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 CLP1Q92989 425 aaKnown RBP17.34■□□□□ 0.37
COL1A1-211ENST00000507689 CALML4Q96GE6 196 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 AK8Q96MA6 479 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 MRPL9Q9BYD2 267 aaKnown RBP17.34■□□□□ 0.37
COL1A1-211ENST00000507689 C2orf40Q9H1Z8 148 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 BHMT2Q9H2M3 363 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 ZSCAN16Q9H4T2 348 aaPredicted RBP17.34■□□□□ 0.37
COL1A1-211ENST00000507689 IFT122Q9HBG6 1241 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 XPNPEP1Q9NQW7 623 aa17.34■□□□□ 0.37
COL1A1-211ENST00000507689 RBAK-RBAKDNI3L0D1 243 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 CYP11B2P19099 503 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 ARL2P36404 184 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 UBA7P41226 1012 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 PTENP60484 403 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 AAK1Q2M2I8 961 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 TIGD5Q53EQ6 642 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 NOTUMQ6P988 496 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 LRRC43Q8N309 656 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 CNNM3Q8NE01 707 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 DEPTORQ8TB45 409 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 KIFAP3Q92845 792 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 PPP2R3CQ969Q6 453 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 MRPL38Q96DV4 380 aaKnown RBP17.33■□□□□ 0.36
COL1A1-211ENST00000507689 TRIM6Q9C030 488 aaPredicted RBP17.33■□□□□ 0.36
COL1A1-211ENST00000507689 LMAN2LQ9H0V9 348 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 AGPAT5Q9NUQ2 364 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 MRPL42Q9Y6G3 142 aaKnown RBP17.33■□□□□ 0.36
COL1A1-211ENST00000507689 LAMA2P24043 3122 aaKnown RBP17.33■□□□□ 0.36
COL1A1-211ENST00000507689 TTC3P53804 2025 aa17.33■□□□□ 0.36
COL1A1-211ENST00000507689 CARNS1A5YM72 827 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms