RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 PCDHA13Q9Y5I0 950 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 COL4A3BPQ9Y5P4 624 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 TACC1O75410 805 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 GFPT2O94808 682 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 NR3C1P04150 777 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 ASNSP08243 561 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 GCLMP48507 274 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 BACE1P56817 501 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 MTMR1Q13613 665 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 TDRD12Q587J7 1177 aaKnown RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 HYIQ5T013 277 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 IQCEQ6IPM2 695 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PHLDB3Q6NSJ2 640 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 SWSAP1Q6NVH7 229 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 TAS1R3Q7RTX0 852 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 TRIM58Q8NG06 486 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 FAM71BQ8TC56 605 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 SLC35C1Q96A29 364 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 CCDC127Q96BQ5 260 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PDCD2LQ9BRP1 358 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 GANQ9H2C0 597 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 VIPAS39Q9H9C1 493 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PXMP2Q9NR77 195 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 RNF181Q9P0P0 153 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PPP1R9AQ9ULJ8 1098 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 FAN1Q9Y2M0 1017 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 JRKLQ9Y4A0 524 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 AFG3L2Q9Y4W6 797 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 SNCAIPQ9Y6H5 919 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 SPDYE16A6NNV3 312 aaPredicted RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 CIITAP33076 1130 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 TNNT3P45378 269 aaPredicted RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 HSD17B4P51659 736 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 ASTE1Q2TB18 679 aaPredicted RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 EAPPQ56P03 285 aaPredicted RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 PADI6Q6TGC4 694 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 POMGNT1Q8WZA1 660 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 BORCS6Q96GS4 357 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 SH2D4AQ9H788 454 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 MED4Q9NPJ6 270 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 SNX12Q9UMY4 172 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 VPS13AQ96RL7 3174 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 LCTP09848 1927 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 MCM3APO60318 1980 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 KIF13BQ9NQT8 1826 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 PIK3CDO00329 1044 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 O00370 1275 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 AKR1B10O60218 316 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 STBD1O95210 358 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 LCA5LO95447 670 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 HARSP12081 509 aaKnown RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 ABCB4P21439 1286 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 PSMC4P43686 418 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 RARRES1P49788 294 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 MAP3K10Q02779 954 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 ORC1Q13415 861 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 ZSCAN26Q16670 478 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 KNOP1Q1ED39 458 aaKnown RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 SKIDA1Q1XH10 827 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 FAM102BQ5T8I3 360 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 NAA35Q5VZE5 725 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 MAP1SQ66K74 1059 aaPredicted RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 RNF207Q6ZRF8 634 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 ZNF720Q7Z2F6 126 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 IRF2BP2Q7Z5L9 587 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 PRPF38AQ8NAV1 312 aaKnown RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 SUPT20HQ8NEM7 779 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 GOLGA5Q8TBA6 731 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 RNF25Q96BH1 459 aaPredicted RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 ARHGEF26Q96DR7 871 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 ALS2CR12Q96Q35 445 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 GABBR1Q9UBS5 961 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 DMGDHQ9UI17 866 aaKnown RBP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 STK24Q9Y6E0 443 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 PSME4Q14997 1843 aa5.02□□□□□ -1.61
ATP2C1-212ENST00000507488 KIAA1217Q5T5P2 1943 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 PRLRP16471 622 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 MARCKSL1P49006 195 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 FKBP3Q00688 224 aaKnown RBP5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 WDR78Q5VTH9 848 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 CCDC70Q6NSX1 233 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 PDXDC1Q6P996 788 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 FOXR2Q6PJQ5 311 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 CHRDL2Q6WN34 429 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 CCNI2Q6ZMN8 369 aaPredicted RBP5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 CACNA2D4Q7Z3S7 1137 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 FAM83AQ86UY5 434 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 CREG2Q8IUH2 290 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 GLYCTKQ8IVS8 523 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 ZNF280CQ8ND82 737 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 LNX1Q8TBB1 728 aaPredicted RBP5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 FAM118BQ9BPY3 351 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 PORCNQ9H237 461 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 UMODL1Q5DID0 1318 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 WDR87Q6ZQQ6 2873 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 K7ENM7 598 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 NR3C2P08235 984 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 UCHL3P15374 230 aa5.01□□□□□ -1.61
ATP2C1-212ENST00000507488 GCFC2P16383 781 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms