RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CYP1B1Q16678 543 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 ZNF568Q3ZCX4 644 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 BZW1Q7L1Q6 419 aaKnown RBP19.18■□□□□ 0.66
NUP54-205ENST00000507257 CYFIP1Q7L576 1253 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 DNAAF5Q86Y56 855 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 RHOT2Q8IXI1 618 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 KCTD17Q8N5Z5 321 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 SYT2Q8N9I0 419 aaPredicted RBP19.18■□□□□ 0.66
NUP54-205ENST00000507257 FAM212AQ96EL1 285 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 ACSBG1Q96GR2 724 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 NYXQ9GZU5 481 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 SNX24Q9Y343 169 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 FRMPD4Q14CM0 1322 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 RASGRF2O14827 1237 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 ALDH5A1P51649 535 aaPredicted RBP19.17■□□□□ 0.66
NUP54-205ENST00000507257 MKRN3Q13064 507 aaKnown RBP19.17■□□□□ 0.66
NUP54-205ENST00000507257 TRMT10CQ7L0Y3 403 aaKnown RBP19.17■□□□□ 0.66
NUP54-205ENST00000507257 TXNRD3Q86VQ6 643 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 SLFN12Q8IYM2 578 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 GLG1Q92896 1179 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 TAOK3Q9H2K8 898 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 SEMA4AQ9H3S1 761 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 SAP30BPQ9UHR5 308 aaKnown RBP19.17■□□□□ 0.66
NUP54-205ENST00000507257 ASTN1O14525 1302 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 FOCADQ5VW36 1801 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 GPR75-ASB3A0A0A6YYF3 556 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 TLDC2A0PJX2 215 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 IBSPP21815 317 aaPredicted RBP19.17■□□□□ 0.66
NUP54-205ENST00000507257 C11orf91Q3C1V1 193 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 FAM133BQ5BKY9 247 aaKnown RBP19.17■□□□□ 0.66
NUP54-205ENST00000507257 DCAF17Q5H9S7 520 aaPredicted RBP19.17■□□□□ 0.66
NUP54-205ENST00000507257 ASRGL1Q7L266 308 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 NLRP3Q96P20 1036 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 MKNK1Q9BUB5 465 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 ECT2Q9H8V3 914 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 SLC5A4Q9NY91 659 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 SLAIN2Q9P270 581 aa19.17■□□□□ 0.66
NUP54-205ENST00000507257 ATP5DP30049 168 aa19.16■□□□□ 0.66
NUP54-205ENST00000507257 RPL21P46778 160 aaKnown RBP19.16■□□□□ 0.66
NUP54-205ENST00000507257 DIXDC1Q155Q3 683 aa19.16■□□□□ 0.66
NUP54-205ENST00000507257 CDCA2Q69YH5 1023 aaPredicted RBP19.16■□□□□ 0.66
NUP54-205ENST00000507257 SERPINB12Q96P63 405 aa19.16■□□□□ 0.66
NUP54-205ENST00000507257 CDCA7Q9BWT1 371 aaPredicted RBP19.16■□□□□ 0.66
NUP54-205ENST00000507257 MTFR1LQ9H019 292 aa19.16■□□□□ 0.66
NUP54-205ENST00000507257 JMJD4Q9H9V9 463 aa19.16■□□□□ 0.66
NUP54-205ENST00000507257 MTMR4Q9NYA4 1195 aa19.16■□□□□ 0.66
NUP54-205ENST00000507257 ARL2BPQ9Y2Y0 163 aa19.16■□□□□ 0.66
NUP54-205ENST00000507257 IGSF9BQ9UPX0 1349 aa19.16■□□□□ 0.66
NUP54-205ENST00000507257 IGKV6D-41A0A0C4DH26 115 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 MED24O75448 989 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 RFX1P22670 979 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 KCNJ2P63252 427 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 CACNB1Q02641 598 aaPredicted RBP19.15■□□□□ 0.66
NUP54-205ENST00000507257 CCDC15Q0P6D6 951 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 PRPF4BQ13523 1007 aaKnown RBP19.15■□□□□ 0.66
NUP54-205ENST00000507257 PPP2R5AQ15172 486 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 UBE2SQ16763 222 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 BICDL1Q6ZP65 573 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 BARGINQ6ZT62 677 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 C15orf52Q6ZUT6 534 aaKnown RBP19.15■□□□□ 0.66
NUP54-205ENST00000507257 GLYCTKQ8IVS8 523 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 UBL4BQ8N7F7 174 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 PRELID2Q8N945 189 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 ART4Q93070 314 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 THOC1Q96FV9 657 aaKnown RBP19.15■□□□□ 0.66
NUP54-205ENST00000507257 RPS6KC1Q96S38 1066 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 RXFP1Q9HBX9 757 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 PRKAG3Q9UGI9 489 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 CORO1CQ9ULV4 474 aaPredicted RBP19.15■□□□□ 0.66
NUP54-205ENST00000507257 L3MBTL1Q9Y468 752 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 TBX3O15119 743 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 LUC7L3O95232 432 aaKnown RBP19.15■□□□□ 0.66
NUP54-205ENST00000507257 MYCNP04198 464 aaPredicted RBP19.15■□□□□ 0.66
NUP54-205ENST00000507257 ZNF543Q08ER8 600 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 EXOC3L1Q86VI1 746 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 SFR1Q86XK3 245 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 ARMC2Q8NEN0 867 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 ERMNQ8TAM6 284 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 ALG3Q92685 438 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 KLHL29Q96CT2 875 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 OLFML3Q9NRN5 406 aa19.15■□□□□ 0.66
NUP54-205ENST00000507257 FRMPD2Q68DX3 1309 aaPredicted RBP19.15■□□□□ 0.66
NUP54-205ENST00000507257 IGF2BP3O00425 579 aaKnown RBP eCLIP19.14■□□□□ 0.65
NUP54-205ENST00000507257 EIF3DO15371 548 aaKnown RBP eCLIP19.14■□□□□ 0.65
NUP54-205ENST00000507257 SMNDC1O75940 238 aaKnown RBP eCLIP19.14■□□□□ 0.65
NUP54-205ENST00000507257 CCNB1P14635 433 aa19.14■□□□□ 0.65
NUP54-205ENST00000507257 RPA1P27694 616 aa19.14■□□□□ 0.65
NUP54-205ENST00000507257 SPIRE1Q08AE8 756 aa19.14■□□□□ 0.65
NUP54-205ENST00000507257 SLC15A2Q16348 729 aa19.14■□□□□ 0.65
NUP54-205ENST00000507257 TCERG1LQ5VWI1 586 aa19.14■□□□□ 0.65
NUP54-205ENST00000507257 EPS8L3Q8TE67 593 aaKnown RBP19.14■□□□□ 0.65
NUP54-205ENST00000507257 FAM163AQ96GL9 167 aaPredicted RBP19.14■□□□□ 0.65
NUP54-205ENST00000507257 ZNF570Q96NI8 536 aa19.14■□□□□ 0.65
NUP54-205ENST00000507257 REEP2Q9BRK0 252 aa19.14■□□□□ 0.65
NUP54-205ENST00000507257 DNM3Q9UQ16 869 aa19.14■□□□□ 0.65
NUP54-205ENST00000507257 MYO3BQ8WXR4 1341 aa19.14■□□□□ 0.65
NUP54-205ENST00000507257 POTEFA5A3E0 1075 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 PPP1R11O60927 126 aaPredicted RBP19.13■□□□□ 0.65
NUP54-205ENST00000507257 POTEIP0CG38 1075 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms