RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 NPTX2P47972 431 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 DNM2P50570 870 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 CASP5P51878 434 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 DMP1Q13316 513 aaPredicted RBP15.67■□□□□ 0.1
RNF4-208ENST00000507247 SNX17Q15036 470 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 ZNF658Q5TYW1 1059 aaPredicted RBP15.67■□□□□ 0.1
RNF4-208ENST00000507247 FAM126BQ8IXS8 530 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 TRIML1Q8N9V2 468 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 CCDC47Q96A33 483 aaKnown RBP15.67■□□□□ 0.1
RNF4-208ENST00000507247 MAP7D2Q96T17 732 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 SEZ6LQ9BYH1 1024 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 C17orf75Q9HAS0 396 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 OLFML3Q9NRN5 406 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 LARSQ9P2J5 1176 aaKnown RBP15.67■□□□□ 0.1
RNF4-208ENST00000507247 CCDC169A6NNP5 214 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 RBAK-RBAKDNI3L0D1 243 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 SLC16A4O15374 487 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 CD4P01730 458 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 MYBP10242 640 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 NAMPTP43490 491 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 GPC3P51654 580 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 NCKAP1LP55160 1127 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 NLRP12P59046 1061 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 TYRO3Q06418 890 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 TMEM62Q0P6H9 643 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 PSMD2Q13200 908 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 PTK7Q13308 1070 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 MXD4Q14582 209 aaPredicted RBP15.66■□□□□ 0.1
RNF4-208ENST00000507247 PPP2R5AQ15172 486 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 TRIM71Q2Q1W2 868 aaKnown RBP15.66■□□□□ 0.1
RNF4-208ENST00000507247 TAF2Q6P1X5 1199 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 UBE2Q1Q7Z7E8 422 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 FAM178BQ8IXR5 827 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 SPIRE2Q8WWL2 714 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 IFT74Q96LB3 600 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 NLRP4Q96MN2 994 aa15.66■□□□□ 0.1
RNF4-208ENST00000507247 MRPL44Q9H9J2 332 aaKnown RBP15.66■□□□□ 0.1
RNF4-208ENST00000507247 PDE4DIPQ5VU43 2346 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 LRRIQ4A6NIV6 560 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 K7ENM7 598 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 ASAP2O43150 1006 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 GPR32O75388 356 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 PPP1R37O75864 691 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 SRGAP2CP0DJJ0 459 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 MAPTP10636 758 aaKnown RBP15.65■□□□□ 0.1
RNF4-208ENST00000507247 CD44P16070 742 aaKnown RBP15.65■□□□□ 0.1
RNF4-208ENST00000507247 NLRP11P59045 1033 aaKnown RBP15.65■□□□□ 0.1
RNF4-208ENST00000507247 LRRC26Q2I0M4 334 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 DPCR1Q3MIW9 517 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 TRIM60Q495X7 471 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 ZC2HC1CQ53FD0 456 aaPredicted RBP15.65■□□□□ 0.1
RNF4-208ENST00000507247 C1orf53Q5VUE5 145 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 SASS6Q6UVJ0 657 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 EPM2AIP1Q7L775 607 aaPredicted RBP15.65■□□□□ 0.1
RNF4-208ENST00000507247 ZNF720Q7Z2F6 126 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 NECAB2Q7Z6G3 386 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 RNF149Q8NC42 400 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 TMEM161BQ8NDZ6 487 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 NTPCRQ9BSD7 190 aaKnown RBP15.65■□□□□ 0.1
RNF4-208ENST00000507247 STRA6Q9BX79 667 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 CDHR5Q9HBB8 845 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 KMT5AQ9NQR1 393 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 ARHGAP28Q9P2N2 729 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 NOD1Q9Y239 953 aa15.65■□□□□ 0.1
RNF4-208ENST00000507247 A0A087WZ62 844 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 PQBP1O60828 265 aaKnown RBP15.64■□□□□ 0.09
RNF4-208ENST00000507247 PRPF6O94906 941 aaKnown RBP15.64■□□□□ 0.09
RNF4-208ENST00000507247 GCNT3O95395 438 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 PRCPP42785 496 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 KIZQ2M2Z5 673 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 CDCA2Q69YH5 1023 aaPredicted RBP15.64■□□□□ 0.09
RNF4-208ENST00000507247 TAS1R3Q7RTX0 852 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 ANKRD33Q7Z3H0 272 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 HAUS6Q7Z4H7 955 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 RPAINQ86UA6 219 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 NME8Q8N427 588 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 DEPTORQ8TB45 409 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 FDXACB1Q9BRP7 624 aaPredicted RBP15.64■□□□□ 0.09
RNF4-208ENST00000507247 ADAMTS10Q9H324 1103 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 ST6GALNAC4Q9H4F1 302 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 IFT122Q9HBG6 1241 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 MAPK8IP1Q9UQF2 711 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 MROH7Q68CQ1 1323 aa15.64■□□□□ 0.09
RNF4-208ENST00000507247 TANC1Q9C0D5 1861 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 PPP1R3GB7ZBB8 358 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 CTSHP09668 335 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 SMTNP53814 917 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 ZNF445P59923 1031 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 PTENP60484 403 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 MRPS6P82932 125 aaKnown RBP15.63■□□□□ 0.09
RNF4-208ENST00000507247 GTF2BQ00403 316 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 TLE2Q04725 743 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 POU5F1BQ06416 359 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 MGAT3Q09327 533 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 KCNA1Q09470 495 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 TFDP1Q14186 410 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 STX1AQ16623 288 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 COBLL1Q53SF7 1204 aa15.63■□□□□ 0.09
RNF4-208ENST00000507247 C11orf57Q6ZUT1 292 aaPredicted RBP15.63■□□□□ 0.09
RNF4-208ENST00000507247 ZNF410Q86VK4 478 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms