RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 BLOC1S4Q9NUP1 217 aa20.19■□□□□ 0.82
NPHP4-210ENST00000506941 ANP32AP39687 249 aaKnown RBP20.18■□□□□ 0.82
NPHP4-210ENST00000506941 RABGGTBP53611 331 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 SLC12A3P55017 1021 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 CAPSQ13938 189 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 MXD4Q14582 209 aaPredicted RBP20.18■□□□□ 0.82
NPHP4-210ENST00000506941 AXDND1Q5T1B0 1012 aaPredicted RBP20.18■□□□□ 0.82
NPHP4-210ENST00000506941 FAM102BQ5T8I3 360 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 KCTD17Q8N5Z5 321 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 RNF149Q8NC42 400 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 BSNDQ8WZ55 320 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 GCOM2Q9BZD3 368 aaPredicted RBP20.18■□□□□ 0.82
NPHP4-210ENST00000506941 MINDY3Q9H8M7 445 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 CFAP45Q9UL16 551 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 MYO9BQ13459 2157 aa20.18■□□□□ 0.82
NPHP4-210ENST00000506941 A0A087X0B3 334 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 ENPP3O14638 875 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 GPR182O15218 404 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 ASAP2O43150 1006 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 PLA2G4BP0C869 781 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 RINT1Q6NUQ1 792 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 C1orf186Q6ZWK4 172 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 HERC6Q8IVU3 1022 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 SYT2Q8N9I0 419 aaPredicted RBP20.17■□□□□ 0.82
NPHP4-210ENST00000506941 PHOSPHO2Q8TCD6 241 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 KCNG4Q8TDN1 519 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 PBX4Q9BYU1 374 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 TSPYL2Q9H2G4 693 aaPredicted RBP20.17■□□□□ 0.82
NPHP4-210ENST00000506941 RCOR1Q9UKL0 485 aa20.17■□□□□ 0.82
NPHP4-210ENST00000506941 RALGAPA2Q2PPJ7 1873 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 CUTAO60888 179 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 AMHP03971 560 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 SSBP05455 408 aaKnown RBP eCLIP20.16■□□□□ 0.82
NPHP4-210ENST00000506941 MYOGP15173 224 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 DSC3Q14574 896 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 MYOCDQ8IZQ8 938 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 DAW1Q8N136 415 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 RASSF8Q8NHQ8 419 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 RAD54LQ92698 747 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 FTHL17Q9BXU8 183 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 PCDHA7Q9UN72 937 aa20.16■□□□□ 0.82
NPHP4-210ENST00000506941 YBX2Q9Y2T7 364 aaKnown RBP20.16■□□□□ 0.82
NPHP4-210ENST00000506941 NCLP19338 710 aaKnown RBP20.15■□□□□ 0.82
NPHP4-210ENST00000506941 DNAJB2P25686 324 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 PTENP60484 403 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 NUCB2P80303 420 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 MAPK7Q13164 816 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 MCM6Q14566 821 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 NAALADL2Q58DX5 795 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 ODR4Q5SWX8 454 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 FAM117BQ6P1L5 589 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 SHC4Q6S5L8 630 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 LEO1Q8WVC0 666 aaPredicted RBP20.15■□□□□ 0.82
NPHP4-210ENST00000506941 ADAM2Q99965 735 aa20.15■□□□□ 0.82
NPHP4-210ENST00000506941 HIP1RO75146 1068 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 GJB5O95377 273 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 SFPQP23246 707 aaKnown RBP eCLIP20.14■□□□□ 0.81
NPHP4-210ENST00000506941 PHKA2P46019 1235 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 ME1P48163 572 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 KRT85P78386 507 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 POU5F1BQ06416 359 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 RAD51AP2Q09MP3 1159 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 TFDP1Q14186 410 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 ARSHQ5FYA8 562 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 SRGAP1Q7Z6B7 1085 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 IFNLR1Q8IU57 520 aaPredicted RBP20.14■□□□□ 0.81
NPHP4-210ENST00000506941 CRIPAKQ8N1N5 446 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 TOP1MTQ969P6 601 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 PCDHA11Q9Y5I1 949 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 ATP6V1DQ9Y5K8 247 aa20.14■□□□□ 0.81
NPHP4-210ENST00000506941 COL4A4P53420 1690 aaPredicted RBP20.13■□□□□ 0.81
NPHP4-210ENST00000506941 NPHP3-ACAD11A0A0J9YXS1 232 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 LRRIQ4A6NIV6 560 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 UPP2O95045 317 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 GUCY2CP25092 1073 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 TXLNAP40222 546 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 MBTD1Q05BQ5 628 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 DHX8Q14562 1220 aaKnown RBP20.13■□□□□ 0.81
NPHP4-210ENST00000506941 CDCA2Q69YH5 1023 aaPredicted RBP20.13■□□□□ 0.81
NPHP4-210ENST00000506941 CATSPER4Q7RTX7 472 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 LARP4BQ92615 738 aaKnown RBP20.13■□□□□ 0.81
NPHP4-210ENST00000506941 KIFAP3Q92845 792 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 SPATA32Q96LK8 384 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 NFKBIZQ9BYH8 718 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 PANK2Q9BZ23 570 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 INO80BQ9C086 356 aaPredicted RBP20.13■□□□□ 0.81
NPHP4-210ENST00000506941 RGS18Q9NS28 235 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 CCDC39Q9UFE4 941 aa20.13■□□□□ 0.81
NPHP4-210ENST00000506941 ADGRA3Q8IWK6 1321 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 DENND3A2RUS2 1198 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 C9IYK1 514 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 ARHGEF15O94989 841 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 RAB30Q15771 203 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 RRAGBQ5VZM2 374 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 GPBP1Q86WP2 473 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 PDILTQ8N807 584 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 NKX2-4Q9H2Z4 354 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 STK17AQ9UEE5 414 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 TRIP11Q15643 1979 aa20.12■□□□□ 0.81
NPHP4-210ENST00000506941 LCHNA4D1U4 455 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms