RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 NECTIN4Q96NY8 510 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 PPP1R16BQ96T49 567 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 TRAIPQ9BWF2 469 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 RNF26Q9BY78 433 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 MRPL9Q9BYD2 267 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 SLKQ9H2G2 1235 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 CHST12Q9NRB3 414 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 DISC1Q9NRI5 854 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 NR2E1Q9Y466 385 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 HIDE1A8MVS5 230 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 ADAMTS3O15072 1205 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 ZNF862O60290 1169 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 JAK3P52333 1124 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 AKAP17AQ02040 695 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 ITIH3Q06033 890 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 SCRN1Q12765 414 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 TARBP2Q15633 366 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 TRMT1LQ7Z2T5 733 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 SLC39A11Q8N1S5 342 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 NECAB1Q8N987 351 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 GTF3C6Q969F1 213 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 SNX21Q969T3 373 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 ZSCAN31Q96LW9 406 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 SH3GLB2Q9NR46 395 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 TSHZ2Q9NRE2 1034 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 SH2B1Q9NRF2 756 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 KMT2EQ8IZD2 1858 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 USP34Q70CQ2 3546 aa12.74□□□□□ -0.37
CCHCR1-220ENST00000506831 MSH4O15457 936 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 EDIL3O43854 480 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 GAS7O60861 476 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 ALDH7A1P49419 539 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 PRKCEQ02156 737 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 TBC1D8BQ0IIM8 1120 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 ST3GAL1Q11201 340 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 TCF15Q12870 199 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 NTRK3Q16288 839 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 CLLU1OSQ5K130 101 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 CES5AQ6NT32 575 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 HSCBQ8IWL3 235 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 LRRC71Q8N4P6 559 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 SLC5A5Q92911 643 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 TMX3Q96JJ7 454 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 NIFKQ9BYG3 293 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 ADAM7Q9H2U9 754 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 HCFC2Q9Y5Z7 792 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 IRAK3Q9Y616 596 aa12.73□□□□□ -0.37
CCHCR1-220ENST00000506831 PTPRZ1P23471 2315 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 IGKV6-21A0A0C4DH24 114 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 C2orf71A6NGG8 1288 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 SKIP12755 728 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 IFNAR1P17181 557 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 AVPR2P30518 371 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 GIT2Q14161 759 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 XKR3Q5GH77 459 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 CCDC83Q8IWF9 413 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 UBALD2Q8IYN6 164 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 RIPOR3Q96MK2 946 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 TEKT3Q9BXF9 490 aa12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 GCOM2Q9BZD3 368 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 INO80BQ9C086 356 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-220ENST00000506831 CYP3A7-CYP3A51PA0A087WV96 503 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 K7ELQ4 463 aaPredicted RBP12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 CLASP2O75122 1294 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 ZNF623O75123 536 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 PSMD10O75832 226 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 CYP3A7P24462 503 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 PBX3P40426 434 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 MTHFRP42898 656 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 DNM2P50570 870 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 POLGP54098 1239 aaPredicted RBP12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 Q4G0T1 1027 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 LLGL2Q6P1M3 1020 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 B3GNT9Q6UX72 402 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 ZNF410Q86VK4 478 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 FAM177A1Q8N128 213 aaPredicted RBP12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 NLRP7Q8WX94 980 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 PHKBQ93100 1093 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 TMEM169Q96HH4 297 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 SCLT1Q96NL6 688 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 CEP89Q96ST8 783 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 PHOX2BQ99453 314 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 UNC45AQ9H3U1 944 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 STK39Q9UEW8 545 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 SORCS3Q9UPU3 1222 aa12.71□□□□□ -0.37
CCHCR1-220ENST00000506831 ZFHX2Q9C0A1 2572 aaPredicted RBP12.71□□□□□ -0.38
CCHCR1-220ENST00000506831 RIF1Q5UIP0 2472 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 CPLX1O14810 134 aa12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 STBD1O95210 358 aa12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 CXCL14O95715 111 aa12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 SFPQP23246 707 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 PHKA2P46019 1235 aa12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 VCPP55072 806 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 BCAR1P56945 870 aa12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 MTMR3Q13615 1198 aa12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 UGCGQ16739 394 aa12.7□□□□□ -0.38
CCHCR1-220ENST00000506831 CPLX2Q6PUV4 134 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms