RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 BSNDQ8WZ55 320 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 DDX12PQ92771 950 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 STAMQ92783 540 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 DRC1Q96MC2 740 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 OSMRQ99650 979 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 C7orf25Q9BPX7 421 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 REEP2Q9BRK0 252 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 FDXACB1Q9BRP7 624 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-210ENST00000506767 NFKBIZQ9BYH8 718 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 LRRC27Q9C0I9 530 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 C17orf75Q9HAS0 396 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 LMBRD1Q9NUN5 540 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 DARSP14868 501 aaKnown RBP14.22□□□□□ -0.13
TCOF1-210ENST00000506767 LIG1P18858 919 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 EIF4BP23588 611 aaKnown RBP14.22□□□□□ -0.13
TCOF1-210ENST00000506767 PTENP60484 403 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 AMPD3Q01432 767 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-210ENST00000506767 FPGSQ05932 587 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 RAD51AP2Q09MP3 1159 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 LPIN1Q14693 890 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 KRBA2Q6ZNG9 492 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 CEP57L1Q8IYX8 460 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 USP38Q8NB14 1042 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 NLRP7Q8WX94 980 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 PAGE5Q96GU1 130 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 ZNF668Q96K58 619 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-210ENST00000506767 PPP1R16BQ96T49 567 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 NTPCRQ9BSD7 190 aaKnown RBP14.22□□□□□ -0.13
TCOF1-210ENST00000506767 TRIM9Q9C026 710 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 MYH11P35749 1972 aa14.22□□□□□ -0.13
TCOF1-210ENST00000506767 FRMD3A2A2Y4 597 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 SFI1A8K8P3 1242 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 NR1I2O75469 434 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 SRGAP2CP0DJJ0 459 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 NAMPTP43490 491 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 MDM2Q00987 491 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-210ENST00000506767 PPIGQ13427 754 aaKnown RBP eCLIP14.21□□□□□ -0.131e-7■■■■□ 22.3
TCOF1-210ENST00000506767 TFDP1Q14186 410 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 PPP2R5AQ15172 486 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 PLEKHG4Q58EX7 1191 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 CDCA2Q69YH5 1023 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-210ENST00000506767 TSHZ1Q6ZSZ6 1077 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 C16orf59Q7L2K0 433 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 DYMQ7RTS9 669 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 SRGAP1Q7Z6B7 1085 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 RNF149Q8NC42 400 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 NLRP4Q96MN2 994 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 TIGD1Q96MW7 591 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 LBHD1Q9BQE6 289 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-210ENST00000506767 GCOM2Q9BZD3 368 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-210ENST00000506767 AGO3Q9H9G7 860 aaKnown RBP14.21□□□□□ -0.13
TCOF1-210ENST00000506767 IL23AQ9NPF7 189 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 GINS2Q9Y248 185 aa14.21□□□□□ -0.13
TCOF1-210ENST00000506767 NOC2LQ9Y3T9 749 aaKnown RBP14.21□□□□□ -0.13
TCOF1-210ENST00000506767 RBAK-RBAKDNI3L0D1 243 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 KRT18P05783 430 aaKnown RBP14.2□□□□□ -0.14
TCOF1-210ENST00000506767 MYL1P05976 194 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 PFKMP08237 780 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 GHRP10912 638 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 PLS3P13797 630 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 MAGEA10P43363 369 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-210ENST00000506767 AFMP43652 599 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 NPTX2P47972 431 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 EPHB4P54760 987 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 PEX3P56589 373 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 KANK3Q6NY19 840 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 FAM43BQ6ZT52 329 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-210ENST00000506767 DEFB128Q7Z7B8 93 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 ELOA2Q8IYF1 753 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-210ENST00000506767 GRAMD1CQ8IYS0 662 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 RPUSD2Q8IZ73 545 aaKnown RBP14.2□□□□□ -0.14
TCOF1-210ENST00000506767 CNNM3Q8NE01 707 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 SPIRE2Q8WWL2 714 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 KCNN1Q92952 543 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 IFT74Q96LB3 600 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 FIZ1Q96SL8 496 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 GDF15Q99988 308 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 INO80BQ9C086 356 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-210ENST00000506767 MINDY3Q9H8M7 445 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 PARVGQ9HBI0 331 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 LARSQ9P2J5 1176 aaKnown RBP14.2□□□□□ -0.14
TCOF1-210ENST00000506767 KCNG1Q9UIX4 513 aa14.2□□□□□ -0.14
TCOF1-210ENST00000506767 ADGRA3Q8IWK6 1321 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 RPS6KA5O75582 802 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 FAM13AO94988 1023 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 CASP1P29466 404 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 CD52P31358 61 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 PHKA2P46019 1235 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 FXR1P51114 621 aaKnown RBP eCLIP14.19□□□□□ -0.14
TCOF1-210ENST00000506767 DMP1Q13316 513 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-210ENST00000506767 CUL4BQ13620 913 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 TCTN1Q2MV58 587 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 FAM228AQ86W67 206 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 DBF4BQ8NFT6 615 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 TET1Q8NFU7 2136 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 SCLT1Q96NL6 688 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 IFIH1Q9BYX4 1025 aaKnown RBP14.19□□□□□ -0.14
TCOF1-210ENST00000506767 ERVK-5Q9HDB9 667 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 ARHGAP28Q9P2N2 729 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms