RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 KIAA1671Q9BY89 1806 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 RALGAPA2Q2PPJ7 1873 aa14.63□□□□□ -0.07
TCOF1-209ENST00000506630 ZBTB39O15060 712 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 NCK2O43639 380 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 GPR32O75388 356 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 MED24O75448 989 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 RPS6KA5O75582 802 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 UPP2O95045 317 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 LYPLA2O95372 231 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 GPC3P51654 580 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 CRYBB1P53674 252 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-209ENST00000506630 NLRP11P59045 1033 aaKnown RBP14.62□□□□□ -0.07
TCOF1-209ENST00000506630 ATP2C1P98194 919 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-209ENST00000506630 ZP2Q05996 745 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 NFX1Q12986 1120 aaKnown RBP14.62□□□□□ -0.07
TCOF1-209ENST00000506630 EMC2Q15006 297 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 FNDC1Q4ZHG4 1894 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-209ENST00000506630 POTEGQ6S5H5 508 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 DTHD1Q6ZMT9 781 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 CATSPER3Q86XQ3 398 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 ADHFE1Q8IWW8 467 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 SPRYD3Q8NCJ5 442 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 TMEM40Q8WWA1 233 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 NLRP7Q8WX94 980 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 TOP1MTQ969P6 601 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 FBXL18Q96ME1 805 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 POLR3CQ9BUI4 534 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-209ENST00000506630 CLDND1Q9NY35 253 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 LRWD1Q9UFC0 647 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 MTMR6Q9Y217 621 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 NOC2LQ9Y3T9 749 aaKnown RBP14.62□□□□□ -0.07
TCOF1-209ENST00000506630 SQORQ9Y6N5 450 aa14.62□□□□□ -0.07
TCOF1-209ENST00000506630 IGKV6-21A0A0C4DH24 114 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 STX6O43752 255 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 SPATA31C1P0DKV0 1188 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 CCT6AP40227 531 aaKnown RBP14.61□□□□□ -0.07
TCOF1-209ENST00000506630 RFC5P40937 340 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 PRPHP41219 470 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 RESTQ13127 1097 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 ODR4Q5SWX8 454 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 RHPN2Q8IUC4 686 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 EXOC8Q8IYI6 725 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 SNX29Q8TEQ0 813 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 PIGOQ8TEQ8 1089 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 MFSD14AQ96MC6 490 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 MTRQ99707 1265 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 DHX33Q9H6R0 707 aaKnown RBP14.61□□□□□ -0.07
TCOF1-209ENST00000506630 ANKEF1Q9NU02 776 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 SUCLA2Q9P2R7 463 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-209ENST00000506630 PADI3Q9ULW8 664 aa14.61□□□□□ -0.07
TCOF1-209ENST00000506630 TCHHQ07283 1943 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 A0A087WWV3 80 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 VWA3AA6NCI4 1184 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 RPA1P27694 616 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 RARRES1P49788 294 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 PDIA5Q14554 519 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 COL19A1Q14993 1142 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 FAM228AQ86W67 206 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 ZNF710Q8N1W2 664 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 IGSF22Q8N9C0 903 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 TMEM143Q96AN5 459 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 NLRP4Q96MN2 994 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 POP1Q99575 1024 aaKnown RBP14.6□□□□□ -0.07
TCOF1-209ENST00000506630 FTHL17Q9BXU8 183 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 ADAMTS10Q9H324 1103 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 ATP6V0A4Q9HBG4 840 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 ERVK-5Q9HDB9 667 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 ST3GAL5Q9UNP4 418 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 STK24Q9Y6E0 443 aa14.6□□□□□ -0.07
TCOF1-209ENST00000506630 COL4A6Q14031 1691 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 A0A087WZ62 844 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 GPR182O15218 404 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 GAS2O43903 313 aaKnown RBP14.59□□□□□ -0.07
TCOF1-209ENST00000506630 USO1O60763 962 aaKnown RBP14.59□□□□□ -0.07
TCOF1-209ENST00000506630 DGAT1O75907 488 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 BMP15O95972 392 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 RB1P06400 928 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 IBSPP21815 317 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-209ENST00000506630 SF3A1Q15459 793 aaKnown RBP14.59□□□□□ -0.07
TCOF1-209ENST00000506630 IL17AQ16552 155 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 KRT79Q5XKE5 535 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 ARL6IP4Q66PJ3 421 aaKnown RBP14.59□□□□□ -0.07
TCOF1-209ENST00000506630 RTN4RL1Q86UN2 441 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-209ENST00000506630 ZNF410Q86VK4 478 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 FIBCD1Q8N539 461 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 TCP11Q8WWU5 503 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 PSPC1Q8WXF1 523 aaKnown RBP14.59□□□□□ -0.07
TCOF1-209ENST00000506630 LINC01599Q8WXQ3 324 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 NACC1Q96RE7 527 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 FDXACB1Q9BRP7 624 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-209ENST00000506630 COL4A3BPQ9Y5P4 624 aa14.59□□□□□ -0.07
TCOF1-209ENST00000506630 DENND3A2RUS2 1198 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 PP2D1A8MPX8 630 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 ENPP3O14638 875 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 XRCC6P12956 609 aaKnown RBP eCLIP14.58□□□□□ -0.08
TCOF1-209ENST00000506630 DARSP14868 501 aaKnown RBP14.58□□□□□ -0.08
TCOF1-209ENST00000506630 EIF4BP23588 611 aaKnown RBP14.58□□□□□ -0.08
TCOF1-209ENST00000506630 CTNNB1P35222 781 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 IRS1P35568 1242 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms