RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 GPM6BQ13491 265 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 POTEGQ6S5H5 508 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 FERMT3Q86UX7 667 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 NACC1Q96RE7 527 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 RAB34Q9BZG1 259 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 ELAC1Q9H777 363 aaKnown RBP17.31■□□□□ 0.36
MED28-204ENST00000506409 IFT122Q9HBG6 1241 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
MED28-204ENST00000506409 DACT1Q9NYF0 836 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 LRWD1Q9UFC0 647 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 MRPL42Q9Y6G3 142 aaKnown RBP17.31■□□□□ 0.36
MED28-204ENST00000506409 RALGAPA2Q2PPJ7 1873 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 NLRC5Q86WI3 1866 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 C5orf67F2Z3F1 127 aa17.3■□□□□ 0.36
MED28-204ENST00000506409 ASAP2O43150 1006 aa17.3■□□□□ 0.36
MED28-204ENST00000506409 USO1O60763 962 aaKnown RBP17.3■□□□□ 0.36
MED28-204ENST00000506409 RB1P06400 928 aa17.3■□□□□ 0.36
MED28-204ENST00000506409 MXD4Q14582 209 aaPredicted RBP17.3■□□□□ 0.36
MED28-204ENST00000506409 SKIV2LQ15477 1246 aaKnown RBP17.3■□□□□ 0.36
MED28-204ENST00000506409 FAM102BQ5T8I3 360 aa17.3■□□□□ 0.36
MED28-204ENST00000506409 CATSPER4Q7RTX7 472 aa17.3■□□□□ 0.36
MED28-204ENST00000506409 RNF149Q8NC42 400 aa17.3■□□□□ 0.36
MED28-204ENST00000506409 C11orf84Q9BUA3 381 aaPredicted RBP17.3■□□□□ 0.36
MED28-204ENST00000506409 PRDM6Q9NQX0 595 aa17.3■□□□□ 0.36
MED28-204ENST00000506409 CHST12Q9NRB3 414 aa17.3■□□□□ 0.36
MED28-204ENST00000506409 DBR1Q9UK59 544 aaKnown RBP17.3■□□□□ 0.36
MED28-204ENST00000506409 PIN4Q9Y237 131 aaKnown RBP17.3■□□□□ 0.36
MED28-204ENST00000506409 A0A0C4DFX4 3053 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 TBKBP1A7MCY6 615 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 FGFR1P11362 822 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 MUTP22033 750 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 CCT6AP40227 531 aaKnown RBP17.29■□□□□ 0.36
MED28-204ENST00000506409 PRPHP41219 470 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 PDIA5Q14554 519 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 PTPROQ16827 1216 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 TWF2Q6IBS0 349 aaKnown RBP17.29■□□□□ 0.36
MED28-204ENST00000506409 DTHD1Q6ZMT9 781 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 SRGAP1Q7Z6B7 1085 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 ECHDC2Q86YB7 292 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 IGSF22Q8N9C0 903 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 MRPL38Q96DV4 380 aaKnown RBP17.29■□□□□ 0.36
MED28-204ENST00000506409 THEGQ9P2T0 379 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 STK24Q9Y6E0 443 aa17.29■□□□□ 0.36
MED28-204ENST00000506409 A0A0U1RQF3 1178 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 K7ELQ4 463 aaPredicted RBP17.28■□□□□ 0.36
MED28-204ENST00000506409 HOXA2O43364 376 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 PDCP20941 246 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 PHKA2P46019 1235 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 TFDP1Q14186 410 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 ABI1Q8IZP0 508 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 RNF169Q8NCN4 708 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 ASAP3Q8TDY4 903 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 SNX29Q8TEQ0 813 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 PLVAPQ9BX97 442 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 AGPAT5Q9NUQ2 364 aa17.28■□□□□ 0.36
MED28-204ENST00000506409 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
MED28-204ENST00000506409 ARHGEF35A5YM69 484 aa17.27■□□□□ 0.36
MED28-204ENST00000506409 ARL2P36404 184 aa17.27■□□□□ 0.36
MED28-204ENST00000506409 ATP2C1P98194 919 aaPredicted RBP17.27■□□□□ 0.36
MED28-204ENST00000506409 IL17AQ16552 155 aa17.27■□□□□ 0.36
MED28-204ENST00000506409 SPOUT1Q5T280 376 aaKnown RBP17.27■□□□□ 0.36
MED28-204ENST00000506409 MAEAQ7L5Y9 396 aa17.27■□□□□ 0.36
MED28-204ENST00000506409 BRAPQ7Z569 592 aa17.27■□□□□ 0.36
MED28-204ENST00000506409 MCPH1Q8NEM0 835 aa17.27■□□□□ 0.36
MED28-204ENST00000506409 INTS4Q96HW7 963 aaKnown RBP17.27■□□□□ 0.36
MED28-204ENST00000506409 TRAIPQ9BWF2 469 aa17.27■□□□□ 0.36
MED28-204ENST00000506409 TMEM117Q9H0C3 514 aa17.27■□□□□ 0.36
MED28-204ENST00000506409 POLR3FQ9H1D9 316 aaPredicted RBP17.27■□□□□ 0.36
MED28-204ENST00000506409 MINDY3Q9H8M7 445 aa17.27■□□□□ 0.36
MED28-204ENST00000506409 FNDC1Q4ZHG4 1894 aaPredicted RBP17.27■□□□□ 0.35
MED28-204ENST00000506409 PP2D1A8MPX8 630 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 EOMESO95936 686 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 GLRA2P23416 452 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 PTENP60484 403 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 CAPSQ13938 189 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 ECM1Q16610 540 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 TIGD5Q53EQ6 642 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 KRT79Q5XKE5 535 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 PADI6Q6TGC4 694 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 ZNF598Q86UK7 904 aaKnown RBP17.26■□□□□ 0.35
MED28-204ENST00000506409 P2RX5Q93086 422 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 GPRC5CQ9NQ84 441 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 RNF19AQ9NV58 838 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 KIAA1024Q9UPX6 916 aa17.26■□□□□ 0.35
MED28-204ENST00000506409 REV3LO60673 3130 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 INO80B-WBP1J3KQ70 363 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 GRM6O15303 877 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 ERLIN2O94905 339 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 SKIP12755 728 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 ATF7P17544 494 aaPredicted RBP17.25■□□□□ 0.35
MED28-204ENST00000506409 CDC25AP30304 524 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 RAB27AP51159 221 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 POU5F1BQ06416 359 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 PCBP1Q15365 356 aaKnown RBP eCLIP17.25■□□□□ 0.35
MED28-204ENST00000506409 NAALADL2Q58DX5 795 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 LRRC43Q8N309 656 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 ATXN2LQ8WWM7 1075 aaKnown RBP17.25■□□□□ 0.35
MED28-204ENST00000506409 CASD1Q96PB1 797 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 LMAN2LQ9H0V9 348 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms