RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CDYL2Q8N8U2 506 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 OR14C36Q8NHC7 312 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 RSAD2Q8WXG1 361 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 NKD2Q969F2 451 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 FUBP3Q96I24 572 aaKnown RBP eCLIP5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 RAX2Q96IS3 184 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 WDR92Q96MX6 357 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 CEP89Q96ST8 783 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 HAPLN2Q9GZV7 340 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 KIAA1683Q9H0B3 1180 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 CCM2LQ9NUG4 571 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 POLR3BQ9NW08 1133 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 MKS1Q9NXB0 559 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 DPP7Q9UHL4 492 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 EVLQ9UI08 416 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 FAM184BQ9ULE4 1060 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 SHTN1A0MZ66 631 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 B4GALT3O60512 393 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 SASH1O94885 1247 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 CFBP00751 764 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 MRE11P49959 708 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 MEOX1P50221 254 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 MRPS9P82933 396 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 PLEKHG6Q3KR16 790 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 KLHDC10Q6PID8 442 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 KCNK18Q7Z418 384 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 RALYLQ86SE5 291 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 AMOTL1Q8IY63 956 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 KCNC2Q96PR1 638 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 SLC2A13Q96QE2 648 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 FDXACB1Q9BRP7 624 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 USP40Q9NVE5 1235 aa5.46□□□□□ -1.54
TOPBP1-204ENST00000505804 OTOL1A6NHN0 477 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 TRIM75PA6NK02 468 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 PCDHGA12O60330 932 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 ALDH1L1O75891 902 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 OSMP13725 252 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 XPAP23025 273 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 CCND1P24385 295 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 GPR15P49685 360 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 CCT2P78371 535 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 CD69Q07108 199 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 TBR1Q16650 682 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 MUM1Q2TAK8 710 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 AUTS2Q8WXX7 1259 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 ZCCHC4Q9H5U6 513 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 VWA7Q9Y334 891 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 PCDHGA9Q9Y5G4 932 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 PCDHGA8Q9Y5G5 932 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 PCDHGA7Q9Y5G6 932 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 PCDHGA6Q9Y5G7 932 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 PCDHGA3Q9Y5H0 932 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 PCDHGA2Q9Y5H1 932 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 CDY2AQ9Y6F7 541 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 DUSP10Q9Y6W6 482 aa5.45□□□□□ -1.54
TOPBP1-204ENST00000505804 C2orf78A6NCI8 922 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 FZD9O00144 591 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 DAPK3O43293 454 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 RBP3P10745 1247 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 MTHFD2P13995 350 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 MTNR1BP49286 362 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 JAG1P78504 1218 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 MGAT5Q09328 741 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 SPIDRQ14159 915 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 ODF1Q14990 250 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 ACAP1Q15027 740 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 ACAP2Q15057 778 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 TTF1Q15361 905 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 MAN2A1Q16706 1144 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 ZNF827Q17R98 1081 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 RNF151Q2KHN1 245 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 ZMAT1Q5H9K5 638 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 AGBL4Q5VU57 503 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 BORAQ6PGQ7 559 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 USP30Q70CQ3 517 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 LGI4Q8N135 537 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 PPP1R14CQ8TAE6 165 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 TSPEARQ8WU66 669 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 GFM2Q969S9 779 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 OSBPL6Q9BZF3 934 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 XYLT2Q9H1B5 865 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 IFT122Q9HBG6 1241 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 INVSQ9Y283 1065 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 SPEF1Q9Y4P9 236 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 RBM8AQ9Y5S9 174 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 GPR45Q9Y5Y3 372 aa5.44□□□□□ -1.54
TOPBP1-204ENST00000505804 KLHL33A6NCF5 533 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 XPOTO43592 962 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 NRP2O60462 931 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 SEC24DO94855 1032 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 FSBPO95073 299 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 LY86O95711 162 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 NEK2P51955 445 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 NRG3P56975 720 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 SESN2P58004 480 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 ATP2C1P98194 919 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 CCDC178Q5BJE1 867 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 LMBR1LQ6UX01 489 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms