RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 NME8Q8N427 588 aa18.78■□□□□ 0.6
SYNE4-207ENST00000505054 LINC00301Q8NCQ3 95 aa18.78■□□□□ 0.6
SYNE4-207ENST00000505054 APBB2Q92870 758 aa18.78■□□□□ 0.6
SYNE4-207ENST00000505054 TOP1MTQ969P6 601 aa18.78■□□□□ 0.6
SYNE4-207ENST00000505054 NACC1Q96RE7 527 aa18.78■□□□□ 0.6
SYNE4-207ENST00000505054 DHX33Q9H6R0 707 aaKnown RBP18.78■□□□□ 0.6
SYNE4-207ENST00000505054 BMP2KQ9NSY1 1161 aaPredicted RBP18.78■□□□□ 0.6
SYNE4-207ENST00000505054 DAXXQ9UER7 740 aaPredicted RBP18.78■□□□□ 0.6
SYNE4-207ENST00000505054 TRPV2Q9Y5S1 764 aa18.78■□□□□ 0.6
SYNE4-207ENST00000505054 STK24Q9Y6E0 443 aa18.78■□□□□ 0.6
SYNE4-207ENST00000505054 ARID2Q68CP9 1835 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 GRXCR2A6NFK2 248 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 PRR33A8MZF0 331 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 VTNP04004 478 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 XRCC6P12956 609 aaKnown RBP eCLIP18.77■□□□□ 0.6
SYNE4-207ENST00000505054 SSTR3P32745 418 aaPredicted RBP18.77■□□□□ 0.6
SYNE4-207ENST00000505054 LONP1P36776 959 aaKnown RBP18.77■□□□□ 0.6
SYNE4-207ENST00000505054 ANP32AP39687 249 aaKnown RBP18.77■□□□□ 0.6
SYNE4-207ENST00000505054 RFC5P40937 340 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 IER5Q5VY09 327 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 AK8Q96MA6 479 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 PNMA5Q96PV4 448 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 PPP1R16BQ96T49 567 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 XPNPEP1Q9NQW7 623 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 DDX19AQ9NUU7 478 aaKnown RBP18.77■□□□□ 0.6
SYNE4-207ENST00000505054 DBR1Q9UK59 544 aaKnown RBP18.77■□□□□ 0.6
SYNE4-207ENST00000505054 KIAA1024Q9UPX6 916 aa18.77■□□□□ 0.6
SYNE4-207ENST00000505054 SRPRBQ9Y5M8 271 aaKnown RBP18.77■□□□□ 0.6
SYNE4-207ENST00000505054 KDM3AQ9Y4C1 1321 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.76■□□□□ 0.59
SYNE4-207ENST00000505054 YEATS4O95619 227 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 TMOD1P28289 359 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 POLGP54098 1239 aaPredicted RBP18.76■□□□□ 0.59
SYNE4-207ENST00000505054 DNM1Q05193 864 aaKnown RBP18.76■□□□□ 0.59
SYNE4-207ENST00000505054 GPM6BQ13491 265 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 LPIN1Q14693 890 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 EMC2Q15006 297 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 STK38Q15208 465 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 FBXO47Q5MNV8 452 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 HYIQ5T013 277 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 KCNK18Q7Z418 384 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 TMEM192Q8IY95 271 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 SLC7A3Q8WY07 619 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 PABPC5Q96DU9 382 aaKnown RBP18.76■□□□□ 0.59
SYNE4-207ENST00000505054 CHAMP1Q96JM3 812 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 CLIC6Q96NY7 704 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 MAP7D2Q96T17 732 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 JPH2Q9BR39 696 aaPredicted RBP18.76■□□□□ 0.59
SYNE4-207ENST00000505054 IFIH1Q9BYX4 1025 aaKnown RBP18.76■□□□□ 0.59
SYNE4-207ENST00000505054 CELF4Q9BZC1 486 aaKnown RBP18.76■□□□□ 0.59
SYNE4-207ENST00000505054 CSRNP2Q9H175 543 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 CDHR5Q9HBB8 845 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 AKT3Q9Y243 479 aa18.76■□□□□ 0.59
SYNE4-207ENST00000505054 MUC6Q6W4X9 2439 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 GPR32O75388 356 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 UPP2O95045 317 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 GHRP10912 638 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 COL19A1Q14993 1142 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 KIZQ2M2Z5 673 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 TMEM119Q4V9L6 283 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 TCEAL5Q5H9L2 206 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 USP49Q70CQ1 688 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 CABP7Q86V35 215 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 CCDC43Q96MW1 224 aaKnown RBP18.75■□□□□ 0.59
SYNE4-207ENST00000505054 ADAMTS10Q9H324 1103 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 NSUN3Q9H649 340 aaKnown RBP18.75■□□□□ 0.59
SYNE4-207ENST00000505054 FAM50BQ9Y247 325 aa18.75■□□□□ 0.59
SYNE4-207ENST00000505054 E9PMD0 336 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 H3BQ06 376 aaPredicted RBP18.74■□□□□ 0.59
SYNE4-207ENST00000505054 M0QZ92 97 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 SPTLC2O15270 562 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 USO1O60763 962 aaKnown RBP18.74■□□□□ 0.59
SYNE4-207ENST00000505054 ALADP13716 330 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 GPC3P51654 580 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 ZRSR1Q15695 479 aaKnown RBP18.74■□□□□ 0.59
SYNE4-207ENST00000505054 SPECC1Q5M775 1068 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 ATL3Q6DD88 541 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 EXOC8Q8IYI6 725 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
SYNE4-207ENST00000505054 LRRC15Q8TF66 581 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 TMEM40Q8WWA1 233 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 TMEM143Q96AN5 459 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 ZNF668Q96K58 619 aaPredicted RBP18.74■□□□□ 0.59
SYNE4-207ENST00000505054 BHMT2Q9H2M3 363 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 AGO3Q9H9G7 860 aaKnown RBP18.74■□□□□ 0.59
SYNE4-207ENST00000505054 ATP6V0A4Q9HBG4 840 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 SUCLA2Q9P2R7 463 aaPredicted RBP18.74■□□□□ 0.59
SYNE4-207ENST00000505054 GINS2Q9Y248 185 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 KIAA1671Q9BY89 1806 aa18.74■□□□□ 0.59
SYNE4-207ENST00000505054 ARHGEF35A5YM69 484 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 PPP6R2O75170 966 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 DGAT1O75907 488 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 UBA7P41226 1012 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 DNM2P50570 870 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 NLRP11P59045 1033 aaKnown RBP18.73■□□□□ 0.59
SYNE4-207ENST00000505054 TSHZ1Q6ZSZ6 1077 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 EPSTI1Q96J88 318 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 PLIN2Q99541 437 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 OSMRQ99650 979 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 MTRQ99707 1265 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms