RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 SOD2P04179 222 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 ALDH1B1P30837 517 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 MATR3P43243 847 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDH9-202ENST00000505020 RNASE9P60153 205 aaKnown RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 PPP2R2AP63151 447 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 TRDNQ13061 729 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 SLC14A1Q13336 389 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 SSPNQ14714 243 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 SURF1Q15526 300 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 FAM110CQ1W6H9 321 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 C1orf141Q5JVX7 400 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 PEAR1Q5VY43 1037 aaPredicted RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 JMJD6Q6NYC1 403 aaPredicted RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 ZNF804AQ7Z570 1209 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 SIAH1Q8IUQ4 282 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 LURAP1LQ8IV03 231 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 SYTL1Q8IYJ3 562 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 KIAA0319LQ8IZA0 1049 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 ANKRD35Q8N283 1001 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 VWA5B2Q8N398 1253 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 TMEM57Q8N5G2 664 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 FAM160A2Q8N612 972 aaPredicted RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 PLBD2Q8NHP8 589 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 COG3Q96JB2 828 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 ZDHHC15Q96MV8 337 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 CCDC43Q96MW1 224 aaKnown RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 NECAB3Q96P71 396 aaPredicted RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 B3GNT5Q9BYG0 378 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 MROH8Q9H579 483 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 VCPKMTQ9H867 229 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 EMC7Q9NPA0 242 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 UBAP1Q9NZ09 502 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 RPS6KA6Q9UK32 745 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 PCOLCE2Q9UKZ9 415 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 PCDHGB4Q9UN71 923 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 KRT87PA6NCN2 255 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 SGK1O00141 431 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 DDX39AO00148 427 aaKnown RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 FMO6PO60774 539 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 ULK1O75385 1050 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 RTN3O95197 1032 aaPredicted RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 GRIA2P42262 883 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 C17orf67Q0P5P2 114 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 AUHQ13825 339 aaKnown RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 ARHGEF6Q15052 776 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 TLR1Q15399 786 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 ELMSAN1Q6PJG2 1045 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 RAB11FIP4Q86YS3 637 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 CAMKK1Q8N5S9 505 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 SPERTQ8NA61 448 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 ATG16L2Q8NAA4 619 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 SMC1BQ8NDV3 1235 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 CTCFLQ8NI51 663 aaPredicted RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 GDAP1Q8TB36 358 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 ADAMTS15Q8TE58 950 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 WNK4Q96J92 1243 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 CABS1Q96KC9 395 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 CRACR2AQ9BSW2 395 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 MXD3Q9BW11 206 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 C1QTNF2Q9BXJ5 285 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 RABEP2Q9H5N1 569 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 PDE7BQ9NP56 450 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 DONSONQ9NYP3 566 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 ADGRE2Q9UHX3 823 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 PTBP2Q9UKA9 531 aaKnown RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 BARX2Q9UMQ3 279 aaPredicted RBP7.87□□□□□ -1.15
CDH9-202ENST00000505020 L1RE1Q9UN81 338 aa7.87□□□□□ -1.15
CDH9-202ENST00000505020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDH9-202ENST00000505020 GOLGA6L10A0A0M3HER8 536 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 GOLGA6L3A6NEY3 463 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 TBKBP1A7MCY6 615 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 FFAR2O15552 330 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 CEP104O60308 925 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 NMT2O60551 498 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 SIN3BO75182 1162 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 ADCY5O95622 1261 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 ATP5BP06576 529 aaKnown RBP7.86□□□□□ -1.15
CDH9-202ENST00000505020 PABPC1P11940 636 aaKnown RBP7.86□□□□□ -1.15
CDH9-202ENST00000505020 PAMP19021 973 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 RDXP35241 583 aaKnown RBP7.86□□□□□ -1.15
CDH9-202ENST00000505020 MMP16P51512 607 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 TGFB2P61812 414 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 TRIM28Q13263 835 aaKnown RBP7.86□□□□□ -1.15
CDH9-202ENST00000505020 LRRC32Q14392 662 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 ARID5BQ14865 1188 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 RASIP1Q5U651 963 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 NSMFQ6X4W1 530 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 B4GALNT4Q76KP1 1039 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 C2orf69Q8N8R5 385 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 CLRN3Q8NCR9 226 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 OR6C4Q8NGE1 309 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 CAPS2Q9BXY5 557 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 TRIM5Q9C035 493 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 TAOK3Q9H2K8 898 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 LRFN1Q9P244 771 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 MTUS1Q9ULD2 1270 aa7.86□□□□□ -1.15
CDH9-202ENST00000505020 COLQQ9Y215 455 aaPredicted RBP7.86□□□□□ -1.15
CDH9-202ENST00000505020 hCG_1807616A0A1W2PRN6 198 aa7.85□□□□□ -1.15
CDH9-202ENST00000505020 MTSS1O43312 755 aa7.85□□□□□ -1.15
CDH9-202ENST00000505020 H2AFYO75367 372 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms