RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 EMSYQ7Z589 1322 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 SMCHD1A6NHR9 2005 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 TARSL2A2RTX5 802 aaKnown RBP10.56□□□□□ -0.72
CSF1R-203ENST00000504875 PIK3CDO00329 1044 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 SLC16A3O15427 465 aaKnown RBP10.56□□□□□ -0.72
CSF1R-203ENST00000504875 KRT5P13647 590 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 WDR78Q5VTH9 848 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 ZNF720Q7Z2F6 126 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 SAAL1Q96ER3 474 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 JPH2Q9BR39 696 aaPredicted RBP10.56□□□□□ -0.72
CSF1R-203ENST00000504875 SEL1LQ9UBV2 794 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 ZSCAN5CA6NGD5 496 aaPredicted RBP10.56□□□□□ -0.72
CSF1R-203ENST00000504875 TGFB1I1O43294 461 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 OPA1O60313 960 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 NEBLO76041 1014 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 ICAM1P05362 532 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 ITGB5P18084 799 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 CEP170P1Q96L14 293 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 KIFC3Q9BVG8 833 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 OLFML3Q9NRN5 406 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 RNF146Q9NTX7 359 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 AIPL1Q9NZN9 384 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 HPCAL4Q9UM19 191 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 ZHX2Q9Y6X8 837 aa10.56□□□□□ -0.72
CSF1R-203ENST00000504875 YWHABP31946 246 aaKnown RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 SSR1P43307 286 aaKnown RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 EPHB4P54760 987 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 MAP2K1Q02750 393 aaPredicted RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 PPP2R5CQ13362 524 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 TMEM132AQ24JP5 1023 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 ZNF662Q6ZS27 426 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 C7orf43Q8WVR3 580 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 WRNIP1Q96S55 665 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 DPH5Q9H2P9 285 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 CHORDC1Q9UHD1 332 aaPredicted RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 ATRNL1Q5VV63 1379 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 FRMD3A2A2Y4 597 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 GRID2IPA4D2P6 1211 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 HOXD13P35453 343 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 SOX5P35711 763 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 GALCP54803 685 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 BAATQ14032 418 aaPredicted RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 TKFCQ3LXA3 575 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 HAUS6Q7Z4H7 955 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 POMGNT1Q8WZA1 660 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 ATG4CQ96DT6 458 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 CBWD1Q9BRT8 395 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 DDX47Q9H0S4 455 aaKnown RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 DONSONQ9NYP3 566 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 WRAP73Q9P2S5 460 aaPredicted RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 ODF2LQ9ULJ1 636 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 WDR46O15213 610 aaKnown RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 EIF3DO15371 548 aaKnown RBP eCLIP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 PJA2O43164 708 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 ZEB2O60315 1214 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 LMNB1P20700 586 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 CARSP49589 748 aaKnown RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 MXI1P50539 228 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 HMGCS2P54868 508 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 BFSP1Q12934 665 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 DMP1Q13316 513 aaPredicted RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 FBXW10Q5XX13 1052 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 SNRNP48Q6IEG0 339 aaKnown RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 TADA2BQ86TJ2 420 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 SYCE1Q8N0S2 351 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 MMGT1Q8N4V1 131 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 AGBL3Q8NEM8 1001 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 UBLCP1Q8WVY7 318 aaPredicted RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 ZKSCAN4Q969J2 545 aaPredicted RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 ELMO3Q96BJ8 720 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 RIT2Q99578 217 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 TMEM206Q9H813 350 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 PLCB1Q9NQ66 1216 aa10.55□□□□□ -0.72
CSF1R-203ENST00000504875 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
CSF1R-203ENST00000504875 KIF4AO95239 1232 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 ATP1A2P50993 1020 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 VAMP7P51809 220 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 SATB1Q01826 763 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 BIRC2Q13490 618 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 CBWD6Q4V339 395 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 CBWD3Q5JTY5 395 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 CBWD5Q5RIA9 395 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 C10orf76Q5T2E6 689 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
CSF1R-203ENST00000504875 FAM107BQ9H098 131 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 SCN9AQ15858 1988 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 PGRMC1O00264 195 aaKnown RBP10.54□□□□□ -0.72
CSF1R-203ENST00000504875 HNRNPDLO14979 420 aaKnown RBP10.54□□□□□ -0.72
CSF1R-203ENST00000504875 BIRC3Q13489 604 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 XXYLT1Q8NBI6 393 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 KMT5AQ9NQR1 393 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 COL20A1Q9P218 1284 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 EXOC7Q9UPT5 735 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 GOLGA6L10A0A0M3HER8 536 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 SPOPO43791 374 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 HPDP32754 393 aaPredicted RBP10.54□□□□□ -0.72
CSF1R-203ENST00000504875 MARSP56192 900 aaKnown RBP10.54□□□□□ -0.72
CSF1R-203ENST00000504875 SOX10P56693 466 aa10.54□□□□□ -0.72
CSF1R-203ENST00000504875 IFFO1Q0D2I5 559 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms