RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 POF1BQ8WVV4 589 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 NLRP7Q8WX94 980 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 KHSRPQ92945 711 aaKnown RBP eCLIP15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 CEP170P1Q96L14 293 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 GCOM2Q9BZD3 368 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 TMEM117Q9H0C3 514 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 ZSWIM4Q9H7M6 989 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 TTC12Q9H892 705 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 ATP6V0A4Q9HBG4 840 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 PCDHGC5Q9Y5F6 944 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 GRXCR2A6NFK2 248 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 POTEMA6NI47 508 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 MEIS3P2A8K0S8 358 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 LINC01565O15544 149 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 IL9P15248 144 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 HOXA11P31270 313 aaPredicted RBP15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 EMC2Q15006 297 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 CALCRLQ16602 461 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 C4orf32Q8N8J7 132 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 TMEM143Q96AN5 459 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 ZSCAN31Q96LW9 406 aaPredicted RBP15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 FOXP1Q9H334 677 aaPredicted RBP15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 CHST12Q9NRB3 414 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 SH2B1Q9NRF2 756 aaPredicted RBP15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 PCDHA12Q9UN75 941 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 COL4A3BPQ9Y5P4 624 aa15.65■□□□□ 0.1
PDLIM7-211ENST00000504318 H3BQ06 376 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 DKC1O60832 514 aaKnown RBP eCLIP15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 GLP2RO95838 553 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 EOMESO95936 686 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 RFC5P40937 340 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 PHKA2P46019 1235 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 PLCB3Q01970 1234 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 LAMTOR4Q0VGL1 99 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 ADAM15Q13444 863 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 KCNC3Q14003 757 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 FERMT3Q86UX7 667 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 IFNLR1Q8IU57 520 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 FAM178BQ8IXR5 827 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 PRPF31Q8WWY3 499 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 C8orf76Q96K31 380 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 JPH2Q9BR39 696 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 AGPAT5Q9NUQ2 364 aa15.64■□□□□ 0.09
PDLIM7-211ENST00000504318 GAS2O43903 313 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 ZNF623O75123 536 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 FGF18O76093 207 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 BAG4O95429 457 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 ZSCAN20P17040 1043 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 IBSPP21815 317 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 U2AF2P26368 475 aaKnown RBP eCLIP15.63■□□□□ 0.097e-7■■■□□ 15.8
PDLIM7-211ENST00000504318 TXKP42681 527 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 RARRES1P49788 294 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 DNM2P50570 870 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 POLGP54098 1239 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 ERVFC1P60507 584 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 HMGN5P82970 282 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 UBE3AQ05086 875 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 UBXN11Q5T124 520 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 TPH2Q8IWU9 490 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 VN1R2Q8NFZ6 395 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 SLC7A3Q8WY07 619 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 MSLNLQ96KJ4 702 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 NLRP4Q96MN2 994 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 BMP2KQ9NSY1 1161 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 DACT1Q9NYF0 836 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 CLEC1BQ9P126 229 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 LZTS1Q9Y250 596 aa15.63■□□□□ 0.09
PDLIM7-211ENST00000504318 A0A087WWV3 80 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 HOXA2O43364 376 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 NCK2O43639 380 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 B4GALT3O60512 393 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 MED24O75448 989 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 LAG3P18627 525 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 SFPQP23246 707 aaKnown RBP eCLIP15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 ARL2P36404 184 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 PBX3P40426 434 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 TOB1P50616 345 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 TRIM29Q14134 588 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 AMHR2Q16671 573 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 XKR9Q5GH70 373 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 PTCRAQ6ISU1 281 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 SRGAP1Q7Z6B7 1085 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 LRRC43Q8N309 656 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 HELQQ8TDG4 1101 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 ASAP3Q8TDY4 903 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 PSPC1Q8WXF1 523 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 ANKEF1Q9NU02 776 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 FAM105AQ9NUU6 356 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 CLDND1Q9NY35 253 aa15.62■□□□□ 0.09
PDLIM7-211ENST00000504318 CSPG5O95196 566 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 MCM7P33993 719 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 PTENP60484 403 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 POU5F1BQ06416 359 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 ORC2Q13416 577 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 NBR1Q14596 966 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 RABEP1Q15276 862 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 KCNT2Q6UVM3 1135 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 AGMOQ6ZNB7 445 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 OTUD6AQ7L8S5 288 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms