RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CPT1CQ8TCG5 803 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 ST8SIA2Q92186 375 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 FBXW5Q969U6 566 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 ARL8AQ96BM9 186 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 AARSD1Q9BTE6 412 aaKnown RBP3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 SLC46A2Q9BY10 475 aa3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 SAE1Q9UBE0 346 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 COL3A1P02461 1466 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P17-201ENST00000504195 ARHGEF17Q96PE2 2063 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 PRODHO43272 600 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 VSIG10L2P0DP72 767 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 HKR1P10072 659 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 TYRP1P17643 537 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 STAT3P40763 770 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 ADAM8P78325 824 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 IFRD2Q12894 506 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 TCIRG1Q13488 830 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 CRY1Q16526 586 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 NSMFQ6X4W1 530 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 C16orf59Q7L2K0 433 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 LRP10Q7Z4F1 713 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 APBB1IPQ7Z5R6 666 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 ARHGEF19Q8IW93 802 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 SIMC1Q8NDZ2 872 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 CAGE1Q8TC20 777 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 ZNF512Q96ME7 567 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 ST7Q9NRC1 585 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 CATSPERZQ9NTU4 200 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 SYBUQ9NX95 663 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 DENND2AQ9ULE3 1009 aa3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 RBM8AQ9Y5S9 174 aaKnown RBP3.31□□□□□ -1.88
HMGB3P17-201ENST00000504195 CENPVL1A0A0U1RR11 272 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 GAGE12BA1L429 117 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 C2orf78A6NCI8 922 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 GAGE12HA6NDE8 117 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 TMEM200CA6NKL6 621 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 TRIM38O00635 465 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 AQP7O14520 342 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 SCAF4O95104 1147 aaKnown RBP3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 JUNP05412 331 aaKnown RBP3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 FGRP09769 529 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 PABPC1P11940 636 aaKnown RBP3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 DDR2Q16832 855 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 KRT40Q6A162 431 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 CCDC62Q6P9F0 684 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 PTRH1Q86Y79 214 aaKnown RBP3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 BCL6BQ8N143 479 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 LRRC47Q8N1G4 583 aaKnown RBP3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 MB21D1Q8N884 522 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 FAM98AQ8NCA5 519 aaKnown RBP3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 LINC00476Q8WZB0 136 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 NELL2Q99435 816 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 SFMBT1Q9UHJ3 866 aa3.3□□□□□ -1.88
HMGB3P17-201ENST00000504195 TRAV20A0A0B4J274 112 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 RBMXL2O75526 392 aaKnown RBP3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 AMY2AP04746 511 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 AMY2BP19961 511 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 SPIDRQ14159 915 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 NTRK3Q16288 839 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 FAM47CQ5HY64 1035 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 ANKS3Q6ZW76 656 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 OSTM1Q86WC4 334 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 MCF2L2Q86YR7 1114 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 CMTR2Q8IYT2 770 aaKnown RBP3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 CELF2-AS1Q8N7Q2 184 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 HIPK4Q8NE63 616 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 ST13P5Q8NFI4 369 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 ZNF384Q8TF68 577 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 HNRNPLLQ8WVV9 542 aaKnown RBP3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 OSBP2Q969R2 916 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 GBP4Q96PP9 640 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 DCLRE1CQ96SD1 692 aaKnown RBP3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 PDCD2LQ9BRP1 358 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 WDR11Q9BZH6 1224 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 KMT5AQ9NQR1 393 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 ARHGEF4Q9NR80 690 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 TLK1Q9UKI8 766 aa3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 EPN1Q9Y6I3 576 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P17-201ENST00000504195 PRAMEF22A3QJZ6 481 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 BLACEA4D250 179 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 SERINC4A6NH21 518 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 RNASET2O00584 256 aaKnown RBP3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 DAPK3O43293 454 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 BMP15O95972 392 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 MMEP08473 750 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 TCF3P15923 654 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 BMPR1AP36894 532 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 SEC24CP53992 1094 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 NPEPPSP55786 919 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 LACTBP83111 547 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 DDB1Q16531 1140 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 CXorf67Q86X51 503 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 CMTM4Q8IZR5 234 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 PLA2G15Q8NCC3 412 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 SLC7A14Q8TBB6 771 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 ASB15Q8WXK1 588 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 E2F7Q96AV8 911 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 ZBTB9Q96C00 473 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 KCNH6Q9H252 994 aa3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 KCNH7Q9NS40 1196 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms