RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 MAGEC2Q9UBF1 373 aaPredicted RBP5.86□□□□□ -1.47
SUB1-204ENST00000504016 DENND2AQ9ULE3 1009 aa5.86□□□□□ -1.47
SUB1-204ENST00000504016 RBM8AQ9Y5S9 174 aaKnown RBP5.86□□□□□ -1.47
SUB1-204ENST00000504016 ZBTB48P10074 688 aaPredicted RBP5.85□□□□□ -1.47
SUB1-204ENST00000504016 HSD3B2P26439 372 aa5.85□□□□□ -1.47
SUB1-204ENST00000504016 FLT3P36888 993 aa5.85□□□□□ -1.47
SUB1-204ENST00000504016 ARHGAP44Q17R89 818 aa5.85□□□□□ -1.47
SUB1-204ENST00000504016 GSPT2Q8IYD1 628 aaKnown RBP5.85□□□□□ -1.47
SUB1-204ENST00000504016 PTPDC1A2A3K4 754 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 B4E1Z4 1266 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 TRAF5O00463 557 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 RGS3P49796 1198 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 KIF11P52732 1056 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 BPIFB4P59827 614 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 SLC6A3Q01959 620 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 ROM1Q03395 351 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 CNGB1Q14028 1251 aaPredicted RBP5.84□□□□□ -1.47
SUB1-204ENST00000504016 DGKDQ16760 1214 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 PLEKHG4Q58EX7 1191 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 GAREM2Q75VX8 874 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 ANKRD53Q8N9V6 530 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 LEO1Q8WVC0 666 aaPredicted RBP5.84□□□□□ -1.47
SUB1-204ENST00000504016 MIEF2Q96C03 454 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 MFSD3Q96ES6 412 aa5.84□□□□□ -1.47
SUB1-204ENST00000504016 SLKQ9H2G2 1235 aaPredicted RBP5.84□□□□□ -1.47
SUB1-204ENST00000504016 C2orf78A6NCI8 922 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 FAM83GA6ND36 823 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 ZNF891A8MT65 544 aaPredicted RBP5.83□□□□□ -1.48
SUB1-204ENST00000504016 CLSTN1O94985 981 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 PRLP01236 227 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 FNTBP49356 437 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 ANTXR2P58335 489 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 ZNF662Q6ZS27 426 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 OTOP1Q7RTM1 612 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 MRGPRGQ86SM5 289 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 LDLRAD3Q86YD5 345 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 MTFR1LQ9H019 292 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 CABP5Q9NP86 173 aa5.83□□□□□ -1.48
SUB1-204ENST00000504016 H2AFY2Q9P0M6 372 aaPredicted RBP5.83□□□□□ -1.48
SUB1-204ENST00000504016 PDE8AO60658 829 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 PEX11BO96011 259 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 SCNN1GP51170 649 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 TCIRG1Q13488 830 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 ELAVL1Q15717 326 aaKnown RBP5.82□□□□□ -1.48
SUB1-204ENST00000504016 SLFN12LQ6IEE8 588 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 FAM111BQ6SJ93 734 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 Q6ZRM9 215 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 ZNF627Q7L945 461 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 CHST14Q8NCH0 376 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 OR5AN1Q8NGI8 311 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 MAML3Q96JK9 1138 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 GPHA2Q96T91 129 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 ACSS2Q9NR19 701 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 INTS7Q9NVH2 962 aaKnown RBP5.82□□□□□ -1.48
SUB1-204ENST00000504016 PLAAQ9Y263 795 aa5.82□□□□□ -1.48
SUB1-204ENST00000504016 A0A087X0B3 334 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 UBA6A0AVT1 1052 aaPredicted RBP5.81□□□□□ -1.48
SUB1-204ENST00000504016 UBE2QL1A1L167 161 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 CBX4O00257 560 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 SLC9A1P19634 815 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 MAN2A2P49641 1150 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 MECP2P51608 486 aaKnown RBP5.81□□□□□ -1.48
SUB1-204ENST00000504016 SEPT7Q16181 437 aaKnown RBP5.81□□□□□ -1.48
SUB1-204ENST00000504016 TTC38Q5R3I4 469 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 KRT40Q6A162 431 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 GPR101Q96P66 508 aaPredicted RBP5.81□□□□□ -1.48
SUB1-204ENST00000504016 TUBGCP5Q96RT8 1024 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 TCF25Q9BQ70 676 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 PCIF1Q9H4Z3 704 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 IFT57Q9NWB7 429 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 THG1LQ9NWX6 298 aaKnown RBP5.81□□□□□ -1.48
SUB1-204ENST00000504016 KCMF1Q9P0J7 381 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 RCAN3Q9UKA8 241 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 ZKSCAN5Q9Y2L8 839 aa5.81□□□□□ -1.48
SUB1-204ENST00000504016 DVL2O14641 736 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 DAPK3O43293 454 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 RAMP2O60895 175 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 RPS6KA4O75676 772 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 SLC25A3Q00325 362 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 GAGE13Q4V321 117 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 PRAMEF9Q5VWM5 478 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 EGFLAMQ63HQ2 1017 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 DNAJC10Q8IXB1 793 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 PLA2G15Q8NCC3 412 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 CHTF18Q8WVB6 975 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 NKD2Q969F2 451 aaPredicted RBP5.8□□□□□ -1.48
SUB1-204ENST00000504016 ZG16BQ96DA0 208 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 WDR92Q96MX6 357 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 PRRX2Q99811 253 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 GPR87Q9BY21 358 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 IL23AQ9NPF7 189 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 B4GALT6Q9UBX8 382 aa5.8□□□□□ -1.48
SUB1-204ENST00000504016 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.8□□□□□ -1.48
SUB1-204ENST00000504016 LOC105371045A0A1W2PR82 267 aa5.79□□□□□ -1.48
SUB1-204ENST00000504016 GSG1L2A8MUP6 293 aa5.79□□□□□ -1.48
SUB1-204ENST00000504016 H7C1D1 291 aa5.79□□□□□ -1.48
SUB1-204ENST00000504016 GAS7O60861 476 aa5.79□□□□□ -1.48
SUB1-204ENST00000504016 PPFIA2O75334 1257 aa5.79□□□□□ -1.48
SUB1-204ENST00000504016 CYP17A1P05093 508 aa5.79□□□□□ -1.48
SUB1-204ENST00000504016 ATP2A2P16615 1042 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms