RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SMTNP53814 917 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 DMP1Q13316 513 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 RAPGEF1Q13905 1077 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 Q3C1V9 767 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 GPIHBP1Q8IV16 184 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 EHBP1Q8NDI1 1231 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 MNS1Q8NEH6 495 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 MCPH1Q8NEM0 835 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 ZNF526Q8TF50 670 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 BSNDQ8WZ55 320 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 IFIH1Q9BYX4 1025 aaKnown RBP23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 XPNPEP1Q9NQW7 623 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 SEPT9Q9UHD8 586 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 FHOD1Q9Y613 1164 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 IGKV6D-21A0A0A0MT36 114 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 ATP4AP20648 1035 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 UBA1P22314 1058 aaKnown RBP23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 RTP1P59025 263 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 KIF5AQ12840 1032 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 BFSP1Q12934 665 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 PNMA8AQ86V59 439 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 CBWD1Q9BRT8 395 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 CDC23Q9UJX2 597 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 TBX20Q9UMR3 447 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 MAPK13O15264 365 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 ELF2Q15723 593 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 GPR162Q16538 588 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 TDRD12Q587J7 1177 aaKnown RBP23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 MAP4K3Q8IVH8 894 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 FGD4Q96M96 766 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 DUSP10Q9Y6W6 482 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 EFCAB8A8MWE9 144 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 PJA2O43164 708 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 JAM2P57087 298 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 MCCD1P59942 119 aaPredicted RBP23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 ASIC2Q16515 512 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 ERCC6LQ2NKX8 1250 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 ZNF302Q9NR11 478 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 HSPBP1Q9NZL4 362 aa23.31■■□□□ 1.32
UBE2D3-216ENST00000503742 DNAJC25-GNG10A0A024R161 153 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 CCDC169A6NNP5 214 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 FARP2O94887 1054 aaPredicted RBP23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 TRIM49P0CI25 452 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 TRIM49CP0CI26 452 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 TGFB3P10600 412 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 SOX10P56693 466 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 AMPD2Q01433 879 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 GFPT1Q06210 699 aaPredicted RBP23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 CBWD6Q4V339 395 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 CBWD3Q5JTY5 395 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 CBWD5Q5RIA9 395 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 INTS8Q75QN2 995 aaKnown RBP23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 IRF2BP2Q7Z5L9 587 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 XXYLT1Q8NBI6 393 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 PCIF1Q9H4Z3 704 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 ATP6V0A4Q9HBG4 840 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 KMT5AQ9NQR1 393 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 EXOC7Q9UPT5 735 aa23.3■■□□□ 1.32
UBE2D3-216ENST00000503742 SOCS7O14512 581 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 MAGEA1P43355 309 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 SNAPC2Q13487 334 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 RDH13Q8NBN7 331 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 KIFC3Q9BVG8 833 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 AJAP1Q9UKB5 411 aaPredicted RBP23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 GSTTP1A0A1W2PQM5 241 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 UNCXA6NJT0 531 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 KLHL30Q0D2K2 578 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 NEDD9Q14511 834 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 SPAG5Q96R06 1193 aa23.29■■□□□ 1.32
UBE2D3-216ENST00000503742 DENND3A2RUS2 1198 aa23.28■■□□□ 1.32
UBE2D3-216ENST00000503742 OATP04181 439 aa23.28■■□□□ 1.32
UBE2D3-216ENST00000503742 KRT13P13646 458 aa23.28■■□□□ 1.32
UBE2D3-216ENST00000503742 PRKCIP41743 596 aa23.28■■□□□ 1.32
UBE2D3-216ENST00000503742 IQCEQ6IPM2 695 aa23.28■■□□□ 1.32
UBE2D3-216ENST00000503742 PCYT2Q99447 389 aa23.28■■□□□ 1.32
UBE2D3-216ENST00000503742 PGK2P07205 417 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 ADSSP30520 456 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 SLC18A3Q16572 532 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 MTERF2Q49AM1 385 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 ZSWIM2Q8NEG5 633 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 SECISBP2LQ93073 1101 aaKnown RBP23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 SLC10A4Q96EP9 437 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 NIFKQ9BYG3 293 aaKnown RBP23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 BZW2Q9Y6E2 419 aaKnown RBP23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 ADGRA3Q8IWK6 1321 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 ANKRD63C9JTQ0 380 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 MYL7Q01449 175 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 ARID5AQ03989 594 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 RSRC2Q7L4I2 434 aaKnown RBP23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 UBXN4Q92575 508 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 CEP89Q96ST8 783 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 MMP19Q99542 508 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 MPHOSPH6Q99547 160 aaKnown RBP23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 MROH8Q9H579 483 aa23.27■■□□□ 1.32
UBE2D3-216ENST00000503742 ZNFX1Q9P2E3 1918 aaKnown RBP23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 GRIN3BO60391 1043 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 CNGA1P29973 690 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 VAMP7P51809 220 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 ERVK-9P63128 1117 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 DLG4P78352 724 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms