RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 A0A087WWV3 80 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 A0A0U1RQF3 1178 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 PER2O15055 1255 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 MARCH6O60337 910 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 COL9A1P20849 921 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 NRIP1P48552 1158 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 DNM2P50570 870 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 GUCY1B3Q02153 619 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 CYP4A11Q02928 519 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 LONRF3Q496Y0 759 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 DIS3L2Q8IYB7 885 aaKnown RBP18.21■□□□□ 0.51
SCLT1-204ENST00000503215 THNSL1Q8IYQ7 743 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 GJD3Q8N144 294 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 CEP170P1Q96L14 293 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 NLRP4Q96MN2 994 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 LXNQ9BS40 222 aa18.21■□□□□ 0.51
SCLT1-204ENST00000503215 MEIS3P2A8K0S8 358 aa18.2■□□□□ 0.5
SCLT1-204ENST00000503215 NCK2O43639 380 aa18.2■□□□□ 0.5
SCLT1-204ENST00000503215 HELQQ8TDG4 1101 aa18.2■□□□□ 0.5
SCLT1-204ENST00000503215 MICAL1Q8TDZ2 1067 aa18.2■□□□□ 0.5
SCLT1-204ENST00000503215 LPPQ93052 612 aa18.2■□□□□ 0.5
SCLT1-204ENST00000503215 DHX33Q9H6R0 707 aaKnown RBP18.2■□□□□ 0.5
SCLT1-204ENST00000503215 IFT122Q9HBG6 1241 aa18.2■□□□□ 0.5
SCLT1-204ENST00000503215 CLEC1BQ9P126 229 aa18.2■□□□□ 0.5
SCLT1-204ENST00000503215 C5orf42Q9H799 3197 aa18.2■□□□□ 0.5
SCLT1-204ENST00000503215 SLITRK3O94933 977 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 GLP2RO95838 553 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 YWHABP31946 246 aaKnown RBP18.19■□□□□ 0.5
SCLT1-204ENST00000503215 SSTR3P32745 418 aaPredicted RBP18.19■□□□□ 0.5
SCLT1-204ENST00000503215 PUS10Q3MIT2 529 aaKnown RBP18.19■□□□□ 0.5
SCLT1-204ENST00000503215 TPH2Q8IWU9 490 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 C4orf19Q8IY42 314 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 VN1R2Q8NFZ6 395 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 PRPF31Q8WWY3 499 aaKnown RBP18.19■□□□□ 0.5
SCLT1-204ENST00000503215 KIF2CQ99661 725 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 NAP1L4Q99733 375 aaKnown RBP18.19■□□□□ 0.5
SCLT1-204ENST00000503215 TMEM60Q9H2L4 133 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 MINDY3Q9H8M7 445 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 C11orf16Q9NQ32 467 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 AAASQ9NRG9 546 aa18.19■□□□□ 0.5
SCLT1-204ENST00000503215 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
SCLT1-204ENST00000503215 FAM86C2PA6NEL3 165 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 MBTPS2O43462 519 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 SRGAP2CP0DJJ0 459 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 LAG3P18627 525 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 ZP2Q05996 745 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 KCNT2Q6UVM3 1135 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 ZNF410Q86VK4 478 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 CCDC83Q8IWF9 413 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 SLFN12Q8IYM2 578 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 EFHBQ8N7U6 833 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 MSLNLQ96KJ4 702 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 EIF2AK1Q9BQI3 630 aaKnown RBP18.18■□□□□ 0.5
SCLT1-204ENST00000503215 TLE6Q9H808 572 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 BRMS1Q9HCU9 246 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 TLR9Q9NR96 1032 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 BARX2Q9UMQ3 279 aaPredicted RBP18.18■□□□□ 0.5
SCLT1-204ENST00000503215 LIMCH1Q9UPQ0 1083 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 PIN4Q9Y237 131 aaKnown RBP18.18■□□□□ 0.5
SCLT1-204ENST00000503215 COL4A3BPQ9Y5P4 624 aa18.18■□□□□ 0.5
SCLT1-204ENST00000503215 FSCN2O14926 492 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 BAG4O95429 457 aaKnown RBP18.17■□□□□ 0.5
SCLT1-204ENST00000503215 EOMESO95936 686 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 ATP2B1P20020 1258 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 PHKA2P46019 1235 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 NDUFV1P49821 464 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 POLGP54098 1239 aaPredicted RBP18.17■□□□□ 0.5
SCLT1-204ENST00000503215 CDC42EP1Q00587 391 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 UBE3AQ05086 875 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 LAMTOR4Q0VGL1 99 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 CALCRLQ16602 461 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 XKR9Q5GH70 373 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 TWF2Q6IBS0 349 aaKnown RBP18.17■□□□□ 0.5
SCLT1-204ENST00000503215 CATSPER4Q7RTX7 472 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 ABI1Q8IZP0 508 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 LRRC43Q8N309 656 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 SLC7A3Q8WY07 619 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 MTMR9Q96QG7 549 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 HSD17B14Q9BPX1 270 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 ZSWIM4Q9H7M6 989 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 XPNPEP1Q9NQW7 623 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 CHST12Q9NRB3 414 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 DACT1Q9NYF0 836 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 CD207Q9UJ71 328 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 PCDHA12Q9UN75 941 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 NT5C1B-RDH14C9J2C7 533 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 PI4K2BG5E9Z4 385 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 HOXA2O43364 376 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 SFPQP23246 707 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCLT1-204ENST00000503215 TXKP42681 527 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 PLCB3Q01970 1234 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 EMC2Q15006 297 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 SMAD2Q15796 467 aaKnown RBP18.17■□□□□ 0.5
SCLT1-204ENST00000503215 C8orf34Q49A92 452 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 PLPP4Q5VZY2 271 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 MRPS27Q92552 414 aaKnown RBP18.17■□□□□ 0.5
SCLT1-204ENST00000503215 ZNF558Q96NG5 402 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 JPH2Q9BR39 696 aaPredicted RBP18.17■□□□□ 0.5
SCLT1-204ENST00000503215 LRFN3Q9BTN0 628 aa18.17■□□□□ 0.5
SCLT1-204ENST00000503215 C1QTNF1Q9BXJ1 281 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms