RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CLUL1Q15846 466 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 PRR16Q569H4 304 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 CLLU1OSQ5K130 101 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 SPOUT1Q5T280 376 aaKnown RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 CES5AQ6NT32 575 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 CYP26C1Q6V0L0 522 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 DDX53Q86TM3 631 aaKnown RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 RBM23Q86U06 439 aaKnown RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 PPFIBP1Q86W92 1011 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 RAB11FIP4Q86YS3 637 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 GPR65Q8IYL9 337 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 ZDHHC14Q8IZN3 488 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 PLCD3Q8N3E9 789 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 BRF1Q92994 677 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 ZNF274Q96GC6 653 aaPredicted RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 RIPOR3Q96MK2 946 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 UIMC1Q96RL1 719 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 TEKT3Q9BXF9 490 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 GCOM2Q9BZD3 368 aaPredicted RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 TM6SF1Q9BZW5 370 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 DZANK1Q9NVP4 752 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 PCDHA4Q9UN74 947 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 SORCS3Q9UPU3 1222 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 AKT3Q9Y243 479 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 GINS2Q9Y248 185 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 SAMM50Q9Y512 469 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 HCFC2Q9Y5Z7 792 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 ZMYM2Q9UBW7 1377 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 CNTNAP2Q9UHC6 1331 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 HIDE1A8MVS5 230 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 PER2O15055 1255 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 TBX3O15119 743 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 INPPL1O15357 1258 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 ST18O60284 1047 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 GAS7O60861 476 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 PPFIA3O75145 1194 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 REC8O95072 547 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 DEXIO95424 95 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 CTSAP10619 480 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 FGFR1P11362 822 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 PDIA3P30101 505 aaKnown RBP6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 AVPR2P30518 371 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 TECP42680 631 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 CLCN3P51790 818 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 POU5F1BQ06416 359 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 APOBRQ0VD83 1088 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 TCF15Q12870 199 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 PPP2R5CQ13362 524 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 LRCH2Q5VUJ6 765 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 PPP4R3AQ6IN85 833 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 KIAA1841Q6NSI8 718 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 RUFY3Q7L099 469 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 TMC7Q7Z402 723 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 TRIM22Q8IYM9 498 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 CNNM3Q8NE01 707 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 PRSS33Q8NF86 280 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 ETNPPLQ8TBG4 499 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 TMEM169Q96HH4 297 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 CCDC136Q96JN2 1154 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 FAM20AQ96MK3 541 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 TCEANC2Q96MN5 208 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 NAP1L4Q99733 375 aaKnown RBP6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 ZBP1Q9H171 429 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 ZSWIM6Q9HCJ5 1215 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 ENTPD7Q9NQZ7 604 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 KANSL3Q9P2N6 904 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 SNX14Q9Y5W7 946 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 TDRD15B5MCY1 1934 aaKnown RBP6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 PLXNA3P51805 1871 aa6.87□□□□□ -1.31
LSM3P4-201ENST00000502948 RBAK-RBAKDNI3L0D1 243 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 ADAMTS3O15072 1205 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 ASAP2O43150 1006 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 CLASP2O75122 1294 aaKnown RBP6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 EFEMP2O95967 443 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 GCFC2P16383 781 aaKnown RBP6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 BCAR1P56945 870 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 PSMC5P62195 406 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 MTMR3Q13615 1198 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 ATAT1Q5SQI0 421 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 GLB1LQ6UWU2 654 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 C15orf39Q6ZRI6 1047 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 MIER3Q7Z3K6 550 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 SRGAP1Q7Z6B7 1085 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 MRPL10Q7Z7H8 261 aaKnown RBP6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 C4orf19Q8IY42 314 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 LRRC71Q8N4P6 559 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 CMASQ8NFW8 434 aaPredicted RBP6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 TBCKQ8TEA7 893 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 HDAC7Q8WUI4 952 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 PHKBQ93100 1093 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 PGBD4Q96DM1 585 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 IGSF21Q96ID5 467 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 RPGRIP1Q96KN7 1286 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 JAKMIP1Q96N16 626 aaKnown RBP6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 TMEM175Q9BSA9 504 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 UNC45AQ9H3U1 944 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 DHX33Q9H6R0 707 aaKnown RBP6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 IFT122Q9HBG6 1241 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 KCNMB3Q9NPA1 279 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 UBN1Q9NPG3 1134 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms