RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 CDC6Q99741 560 aa5.36□□□□□ -1.55
PROM1-203ENST00000502943 PRDM13Q9H4Q3 707 aa5.36□□□□□ -1.55
PROM1-203ENST00000502943 B3GALT1Q9Y5Z6 326 aa5.36□□□□□ -1.55
PROM1-203ENST00000502943 SMARCA2P51531 1590 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 THOC2Q8NI27 1593 aaKnown RBP5.35□□□□□ -1.55
PROM1-203ENST00000502943 INO80B-WBP1J3KQ70 363 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 MFAP3LO75121 409 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 ARID5AQ03989 594 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 GNL2Q13823 731 aaKnown RBP5.35□□□□□ -1.55
PROM1-203ENST00000502943 GAGE13Q4V321 117 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 TIGD2Q4W5G0 525 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 KRT40Q6A162 431 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 MFSD5Q6N075 450 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 INO80BQ9C086 356 aaPredicted RBP5.35□□□□□ -1.55
PROM1-203ENST00000502943 R3HDMLQ9H3Y0 253 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 ZNF768Q9H5H4 540 aaKnown RBP5.35□□□□□ -1.55
PROM1-203ENST00000502943 NCDNQ9UBB6 729 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 COQ6Q9Y2Z9 468 aa5.35□□□□□ -1.55
PROM1-203ENST00000502943 STC2O76061 302 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 IPO13O94829 963 aaKnown RBP5.34□□□□□ -1.55
PROM1-203ENST00000502943 VSIG10L2P0DP72 767 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 NAT1P18440 290 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 RGS3P49796 1198 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 PTTG1IPP53801 180 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 PLEKHG4Q58EX7 1191 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 PAPD7Q5XG87 772 aaKnown RBP5.34□□□□□ -1.55
PROM1-203ENST00000502943 NAIF1Q69YI7 327 aaPredicted RBP5.34□□□□□ -1.55
PROM1-203ENST00000502943 Q6YL49 198 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 BHLHA9Q7RTU4 235 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 RD3Q7Z3Z2 195 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 CLEC14AQ86T13 490 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 ARL8AQ96BM9 186 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 FOXB1Q99853 325 aa5.34□□□□□ -1.55
PROM1-203ENST00000502943 POLR2AP24928 1970 aaKnown RBP5.33□□□□□ -1.56
PROM1-203ENST00000502943 CENPVL1A0A0U1RR11 272 aa5.33□□□□□ -1.56
PROM1-203ENST00000502943 LPXNO60711 386 aa5.33□□□□□ -1.56
PROM1-203ENST00000502943 HK1P19367 917 aa5.33□□□□□ -1.56
PROM1-203ENST00000502943 GABREP78334 506 aa5.33□□□□□ -1.56
PROM1-203ENST00000502943 LRP10Q7Z4F1 713 aa5.33□□□□□ -1.56
PROM1-203ENST00000502943 PLA2G15Q8NCC3 412 aa5.33□□□□□ -1.56
PROM1-203ENST00000502943 ST8SIA2Q92186 375 aa5.33□□□□□ -1.56
PROM1-203ENST00000502943 CYP4F11Q9HBI6 524 aa5.33□□□□□ -1.56
PROM1-203ENST00000502943 BAZ1AQ9NRL2 1556 aaPredicted RBP5.33□□□□□ -1.56
PROM1-203ENST00000502943 ATAD2BQ9ULI0 1458 aa5.32□□□□□ -1.56
PROM1-203ENST00000502943 SCAF4O95104 1147 aaKnown RBP5.32□□□□□ -1.56
PROM1-203ENST00000502943 SLC6A3Q01959 620 aa5.32□□□□□ -1.56
PROM1-203ENST00000502943 DGKDQ16760 1214 aa5.32□□□□□ -1.56
PROM1-203ENST00000502943 ZNF669Q96BR6 464 aaPredicted RBP5.32□□□□□ -1.56
PROM1-203ENST00000502943 EXOC2Q96KP1 924 aa5.32□□□□□ -1.56
PROM1-203ENST00000502943 TINF2Q9BSI4 451 aa5.32□□□□□ -1.56
PROM1-203ENST00000502943 COX11Q9Y6N1 276 aa5.32□□□□□ -1.56
PROM1-203ENST00000502943 RIMBP3CA6NJZ7 1639 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 RIMBP3BA6NNM3 1639 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 RIMBP3Q9UFD9 1639 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 SLC12A8A0AV02 714 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 PPFIA4O75335 1185 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 PRLP01236 227 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 CDK4P11802 303 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 FAM214AQ32MH5 1076 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 OVCH1Q7RTY7 1134 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 ANKFY1Q9P2R3 1169 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 PFDN2Q9UHV9 154 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 DNAI1Q9UI46 699 aa5.31□□□□□ -1.56
PROM1-203ENST00000502943 SPATA31A6Q5VVP1 1343 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 HIP1RO75146 1068 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 JUNP05412 331 aaKnown RBP5.3□□□□□ -1.56
PROM1-203ENST00000502943 HNRNPLP14866 589 aaKnown RBP eCLIP5.3□□□□□ -1.566e-6■□□□□ 11.3
PROM1-203ENST00000502943 ITGB6P18564 788 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 LAG3P18627 525 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 GNAT2P19087 354 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 ZEB1P37275 1124 aaPredicted RBP5.3□□□□□ -1.56
PROM1-203ENST00000502943 FAM189BP81408 668 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 RAB33AQ14088 237 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 SPIDRQ14159 915 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 DCAF17Q5H9S7 520 aaPredicted RBP5.3□□□□□ -1.56
PROM1-203ENST00000502943 WDR92Q96MX6 357 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 IPO9Q96P70 1041 aaKnown RBP5.3□□□□□ -1.56
PROM1-203ENST00000502943 FAM193BQ96PV7 902 aaPredicted RBP5.3□□□□□ -1.56
PROM1-203ENST00000502943 CELF4Q9BZC1 486 aaKnown RBP5.3□□□□□ -1.56
PROM1-203ENST00000502943 SFMBT1Q9UHJ3 866 aa5.3□□□□□ -1.56
PROM1-203ENST00000502943 LAMC3Q9Y6N6 1575 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 AHRRA9YTQ3 701 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 TRIM24O15164 1050 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 NPEPPSP55786 919 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 IRF9Q00978 393 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 ROM1Q03395 351 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 EPHA10Q5JZY3 1008 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 FBXO42Q6P3S6 717 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 CMTM4Q8IZR5 234 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 ZBTB38Q8NAP3 1195 aaPredicted RBP5.29□□□□□ -1.56
PROM1-203ENST00000502943 DYDC2Q96IM9 177 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 C16orf92Q96LL3 132 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 WDR11Q9BZH6 1224 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 SERHL2Q9H4I8 314 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 SLC52A2Q9HAB3 445 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 POLR3BQ9NW08 1133 aaPredicted RBP5.29□□□□□ -1.56
PROM1-203ENST00000502943 NDOR1Q9UHB4 597 aa5.29□□□□□ -1.56
PROM1-203ENST00000502943 ARHGEF17Q96PE2 2063 aaPredicted RBP5.28□□□□□ -1.56
PROM1-203ENST00000502943 RECQL4O94761 1208 aa5.28□□□□□ -1.56
PROM1-203ENST00000502943 GYPEP15421 78 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms